Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU929001 |
| length | 347 |
| lncRNA type | sense_over |
| GC content | 0.52 |
| exon number | 2 |
| gene id | LOC110531200 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 52246372 ~ 52250891 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU928964 | lncRNA | upstream | 50191 | 52198963 ~ 52199354 (+) | True | G816788 |
| TU928957 | lncRNA | upstream | 72804 | 52176538 ~ 52176741 (+) | True | G816781 |
| TU928954 | lncRNA | upstream | 76825 | 52172479 ~ 52172720 (+) | True | G816778 |
| TU928904 | lncRNA | upstream | 89718 | 52158839 ~ 52159827 (+) | True | G816729 |
| TU928941 | lncRNA | upstream | 92202 | 52157128 ~ 52157343 (+) | True | G816765 |
| TU929073 | lncRNA | downstream | 114493 | 52364640 ~ 52366398 (+) | True | G816872 |
| TU929074 | lncRNA | downstream | 116806 | 52366953 ~ 52371758 (+) | True | G816873 |
| TU929076 | lncRNA | downstream | 122037 | 52372184 ~ 52375043 (+) | True | G816875 |
| TU929066 | lncRNA | downstream | 175210 | 52425357 ~ 52443755 (+) | True | G816865 |
| TU929117 | lncRNA | downstream | 179839 | 52429986 ~ 52431199 (+) | True | G816914 |
| XM_021616147.2 | mRNA | upstream | 14602 | 52229754 ~ 52234943 (+) | False | dedd |
| XM_021616148.2 | mRNA | upstream | 14602 | 52229758 ~ 52234943 (+) | False | dedd |
| XM_021616149.2 | mRNA | upstream | 14602 | 52229761 ~ 52234943 (+) | False | dedd |
| XM_036988290.1 | mRNA | upstream | 14602 | 52229766 ~ 52234943 (+) | True | dedd |
| LOC110531199 | mRNA | upstream | 24610 | 52220837 ~ 52224935 (+) | True | LOC110531199 |
| XR_005053283.1 | mRNA | downstream | 970 | 52251117 ~ 52253412 (+) | False | LOC118966072 |
| XM_021616159.2 | mRNA | downstream | 10031 | 52260178 ~ 52293328 (+) | False | LOC110532344 |
| XM_021616161.2 | mRNA | downstream | 10031 | 52260178 ~ 52293328 (+) | False | LOC110532344 |
| XM_021616160.2 | mRNA | downstream | 10032 | 52260179 ~ 52293328 (+) | False | LOC110532344 |
| XM_021616150.2 | mRNA | downstream | 10033 | 52260180 ~ 52294856 (+) | False | LOC110532344 |
| TU927907 | other | upstream | 903051 | 51345372 ~ 51346494 (+) | True | G815767 |
| TU927741 | other | upstream | 1170603 | 51078447 ~ 51078942 (+) | True | G815610 |
| TU927553 | other | upstream | 1449164 | 50796214 ~ 50800381 (+) | False | G815428 |
| TU927551 | other | upstream | 1449164 | 50796320 ~ 50800381 (+) | True | G815428 |
| TU925067 | other | upstream | 3133927 | 49115137 ~ 49115618 (+) | True | G813139 |
| TU929026 | other | downstream | 73124 | 52323271 ~ 52325640 (+) | True | LOC110532349 |
| TU929242 | other | downstream | 476274 | 52726421 ~ 52727520 (+) | True | LOC110532368 |
| TU932380 | other | downstream | 2476724 | 54726871 ~ 54727376 (+) | True | G819897 |
| TU933208 | other | downstream | 2983111 | 55233258 ~ 55233798 (+) | True | G820665 |
| TU933425 | other | downstream | 3280890 | 55531037 ~ 55615401 (+) | False | dlgap4a |
