Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU933191 |
| length | 276 |
| lncRNA type | sense_over |
| GC content | 0.35 |
| exon number | 1 |
| gene id | LOC110532406 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 55217606 ~ 55224372 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006351 | transcription, DNA-templated | biological_process |
| GO:0044424 | obsolete intracellular part | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU933193 | lncRNA | upstream | 2154 | 55221579 ~ 55221882 (+) | True | G820655 |
| TU932713 | lncRNA | upstream | 39212 | 55184604 ~ 55184824 (+) | True | G820211 |
| TU932675 | lncRNA | upstream | 65768 | 55157091 ~ 55158268 (+) | True | G820175 |
| TU932673 | lncRNA | upstream | 67309 | 55155407 ~ 55156727 (+) | True | G820174 |
| TU932676 | lncRNA | upstream | 74756 | 55127150 ~ 55149280 (+) | True | G820176 |
| TU933216 | lncRNA | downstream | 36050 | 55260361 ~ 55260802 (+) | True | G820673 |
| TU933261 | lncRNA | downstream | 74465 | 55298776 ~ 55299160 (+) | True | G820717 |
| TU933278 | lncRNA | downstream | 83403 | 55307714 ~ 55307954 (+) | True | G820734 |
| TU933286 | lncRNA | downstream | 88729 | 55313040 ~ 55313418 (+) | True | G820742 |
| TU933304 | lncRNA | downstream | 96137 | 55320448 ~ 55321476 (+) | True | G820760 |
| XM_021616281.2 | mRNA | upstream | 16671 | 55192353 ~ 55207365 (+) | False | LOC110532404 |
| XM_036988349.1 | mRNA | upstream | 16671 | 55193554 ~ 55207365 (+) | True | LOC110532404 |
| XM_036988340.1 | mRNA | upstream | 289466 | 54926728 ~ 54934570 (+) | True | twist3 |
| XM_021616270.2 | mRNA | upstream | 917863 | 54295022 ~ 54306173 (+) | True | LOC110532395 |
| XM_021616271.2 | mRNA | upstream | 976121 | 54245323 ~ 54247915 (+) | False | LOC110532396 |
| XM_021616290.2 | mRNA | downstream | 103801 | 55328112 ~ 55372587 (+) | True | LOC110532408 |
| XM_021616291.2 | mRNA | downstream | 150864 | 55375175 ~ 55410299 (+) | True | LOC110532409 |
| XM_036988355.1 | mRNA | downstream | 195012 | 55419323 ~ 55425566 (+) | True | LOC110532410 |
| XR_002474920.2 | mRNA | downstream | 248429 | 55472740 ~ 55482776 (+) | False | LOC110533022 |
| XM_021616299.2 | mRNA | downstream | 306722 | 55531033 ~ 55647541 (+) | False | dlgap4a |
| TU932380 | other | upstream | 496660 | 54726871 ~ 54727376 (+) | True | G819897 |
| TU929242 | other | upstream | 2496516 | 52726421 ~ 52727520 (+) | True | LOC110532368 |
| TU929026 | other | upstream | 2898396 | 52323271 ~ 52325640 (+) | True | LOC110532349 |
| TU927907 | other | upstream | 3877542 | 51345372 ~ 51346494 (+) | True | G815767 |
| TU927741 | other | upstream | 4145094 | 51078447 ~ 51078942 (+) | True | G815610 |
| TU933208 | other | downstream | 8947 | 55233258 ~ 55233798 (+) | True | G820665 |
| TU933425 | other | downstream | 306726 | 55531037 ~ 55615401 (+) | False | dlgap4a |
| TU933495 | other | downstream | 473329 | 55697640 ~ 55697978 (+) | True | G820944 |
| TU933965 | other | downstream | 749731 | 55974042 ~ 55975316 (+) | True | G821363 |
| TU934014 | other | downstream | 837395 | 56061706 ~ 56063655 (+) | True | G821409 |
