RNA id: TU868697



Basic Information


Item Value
RNA id TU868697
length 276
lncRNA type intronic
GC content 0.48
exon number 2
gene id G763646
representative True

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 2114680 ~ 2115090 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


cagaaccctgcaacactccagtattaacagaaccctgcagcactccagtattaacagaaccctgcagcactccagtattaacagaaccctgcagcactccagtattaacagaaccctgcagcactccagtattaacagaaccctgcagcactccagtaaTAACAGAACCCTGCAgcactccagtattaacagaaccctgcagcaccccagtattaacagaaccctgcagcactccagtattaacagaaccctgcagcactccagtattaacagaac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU868695 lncRNA downstream 2075 2109857 ~ 2112605 (-) True G763645
TU868679 lncRNA downstream 23291 2056037 ~ 2091389 (-) True G763634
TU868687 lncRNA downstream 26088 2086519 ~ 2088592 (-) True G763638
TU868678 lncRNA downstream 61401 2048314 ~ 2053279 (-) True G763633
TU868664 lncRNA downstream 82426 2018904 ~ 2032254 (-) True G763619
TU868703 lncRNA upstream 25244 2140334 ~ 2141422 (-) True G763652
TU868706 lncRNA upstream 28318 2143408 ~ 2144350 (-) True G763655
TU868707 lncRNA upstream 46157 2161247 ~ 2162044 (-) True LOC118966148
TU868709 lncRNA upstream 48741 2163831 ~ 2164505 (-) True G763658
TU868726 lncRNA upstream 108595 2223685 ~ 2224482 (-) False G763666
XR_005053091.1 mRNA downstream 30266 2083262 ~ 2084414 (-) False LOC118965963
XR_005053090.1 mRNA downstream 39789 2069921 ~ 2074891 (-) True LOC118965962
XR_005053080.1 mRNA downstream 133793 1968575 ~ 1980887 (-) True LOC118965956
XM_036987022.1 mRNA downstream 336215 1744643 ~ 1778465 (-) True LOC110517376
XM_036987021.1 mRNA downstream 377226 1642137 ~ 1737454 (-) True LOC110515190
XR_005053079.1 mRNA upstream 42892 2157982 ~ 2158681 (-) True LOC118965955
XM_036989226.1 mRNA upstream 46671 2161761 ~ 2162609 (-) False LOC118966148
XM_036987011.1 mRNA upstream 97184 2212274 ~ 2354313 (-) False LOC110535267
XM_036987012.1 mRNA upstream 97184 2212274 ~ 2354313 (-) False LOC110535267
XM_036987013.1 mRNA upstream 97184 2212274 ~ 2354313 (-) False LOC110535267
TU868630 other downstream 136449 1962973 ~ 1978231 (-) False G763587
TU867065 other downstream 1248248 861374 ~ 866432 (-) False G762459
TU867058 other downstream 1249568 861374 ~ 865112 (-) False G762459
TU868794 other upstream 358008 2473098 ~ 2486901 (-) False G763719
TU868793 other upstream 359984 2475074 ~ 2486901 (-) True G763719
TU869128 other upstream 1181212 3296302 ~ 3299103 (-) True G763961
TU869858 other upstream 1736881 3851971 ~ 3858893 (-) False LOC110498423
TU870731 other upstream 1898744 4013834 ~ 4016409 (-) False LOC118966151

Expression Profile