RNA id: TU871068



Basic Information


Item Value
RNA id TU871068
length 264
lncRNA type read_through
GC content 0.49
exon number 2
gene id G765214
representative True

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 4700285 ~ 4892679 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


cactaggtctatctatcagtataggcagatcagccaccagacagaaccgtgcactaggtctatctatcagtataggcaggtcagtcaccagacagacagaaccgtgcactaggtctatctatcagtataggcaggtcagccaccagacagacagacagaaccgtgcactaggtctatctatcagtataggcaggtcagtcaccagacagacagaaccgtgcactaggtctatctatcagtataggcaggtcagtcaccagacag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU871064 lncRNA downstream 13770 4685170 ~ 4686515 (-) True G765210
TU871042 lncRNA downstream 62262 4637139 ~ 4638023 (-) True G765188
TU871033 lncRNA downstream 71264 4616913 ~ 4629021 (-) False G765183
TU871155 lncRNA upstream 7663 4900342 ~ 4910027 (-) True G765286
TU871164 lncRNA upstream 11419 4904098 ~ 4907027 (-) True G765290
TU871165 lncRNA upstream 12214 4904893 ~ 4905327 (-) True G765291
TU871148 lncRNA upstream 22291 4914970 ~ 4916039 (-) True G765280
TU871167 lncRNA upstream 26584 4919263 ~ 4929340 (-) True G765292
XM_021594424.2 mRNA downstream 124419 4574163 ~ 4575866 (-) False LOC110515555
XR_005053146.1 mRNA downstream 134884 4564760 ~ 4565401 (-) True LOC118965975
XM_036987132.1 mRNA downstream 164245 4534165 ~ 4536040 (-) True LOC118965974
XR_005053437.1 mRNA downstream 170692 4528651 ~ 4529593 (-) False LOC118966171
XM_036987138.1 mRNA upstream 9207 4901886 ~ 4916456 (-) True LOC118965977
XM_036987139.1 mRNA upstream 30352 4923031 ~ 4933486 (-) False LOC110532986
XM_036987140.1 mRNA upstream 93133 4985812 ~ 5018523 (-) False LOC110518233
XM_036987142.1 mRNA upstream 93133 4985812 ~ 5018523 (-) False LOC110518233
XM_036987145.1 mRNA upstream 93133 4985812 ~ 5018523 (-) False LOC110518233
TU870895 other downstream 124413 4574845 ~ 4575872 (-) True LOC110515555
TU870890 other downstream 164206 4446327 ~ 4536079 (-) False G765100
TU870887 other downstream 232577 4466567 ~ 4467708 (-) True G765100
TU870833 other downstream 380459 4290795 ~ 4319826 (-) True G765059
TU870733 other downstream 683876 4013834 ~ 4016409 (-) True LOC118966151
TU871235 other upstream 162801 5055480 ~ 5057322 (-) True G765347
TU871540 other upstream 404797 5297476 ~ 5298437 (-) True G765579
TU872873 other upstream 1308690 6201369 ~ 6202730 (-) False G766599
TU872875 other upstream 1308690 6201369 ~ 6209209 (-) False G766599
TU872926 other upstream 1358918 6251597 ~ 6256628 (-) True G766640

Expression Profile