RNA id: TU875251



Basic Information


Item Value
RNA id TU875251
length 207
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G768391
representative True

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 8193703 ~ 8193909 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gtaccccctcacgttgactctgtaccaggtGAATTtgaatttggtagcatttctatgttgtcTGATTGAAAAAGAATTTGGGGCATTTCCCCCCCATTTTCCATCCAGGTTGCTCTATTttgtataatatattacactggatctttcttgaataggTTCCTCCAACGTATTCtgagcctctatggtacagtttttattgctatcacA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU875248 lncRNA downstream 4891 8187686 ~ 8188812 (-) True G768389
TU875247 lncRNA downstream 8699 8184572 ~ 8185004 (-) True G768388
TU875246 lncRNA downstream 11238 8182249 ~ 8182465 (-) True G768387
TU875244 lncRNA downstream 12745 8180718 ~ 8180958 (-) True G768385
TU875242 lncRNA downstream 20290 8172953 ~ 8173413 (-) True G768383
TU875262 lncRNA upstream 20337 8214246 ~ 8215009 (-) True G768399
TU875266 lncRNA upstream 27062 8220971 ~ 8221277 (-) False G768402
TU875267 lncRNA upstream 27062 8220971 ~ 8221277 (-) False G768402
TU875268 lncRNA upstream 27062 8220971 ~ 8221277 (-) False G768402
TU875269 lncRNA upstream 27062 8220971 ~ 8221277 (-) False G768402
XM_036987247.1 mRNA downstream 37787 8113636 ~ 8155916 (-) False LOC110510419
XM_036987243.1 mRNA downstream 83137 8083612 ~ 8110566 (-) True brms1
XM_036987245.1 mRNA downstream 124479 8067827 ~ 8069224 (-) True LOC118965985
LOC118965983 mRNA downstream 125980 8066300 ~ 8067723 (-) True LOC118965983
XM_036987244.1 mRNA downstream 129679 8062226 ~ 8064024 (-) True LOC118965984
XM_036987246.1 mRNA upstream 27622 8221531 ~ 8253809 (-) False LOC118936684
XM_036987232.1 mRNA upstream 60886 8254795 ~ 8265001 (-) False krcp
XM_036987231.1 mRNA upstream 60886 8254795 ~ 8265108 (-) False krcp
XM_036987229.1 mRNA upstream 60886 8254795 ~ 8266597 (-) False krcp
XM_036987230.1 mRNA upstream 60886 8254795 ~ 8266598 (-) True krcp
TU875250 other downstream 1805 8189443 ~ 8191898 (-) True G768390
TU874434 other downstream 79633 8112588 ~ 8114070 (-) True LOC110510419
TU873506 other downstream 942628 7245644 ~ 7251075 (-) True G767056
TU873176 other downstream 1224012 6965454 ~ 6969691 (-) True LOC110531380
TU873185 other downstream 1311585 6872836 ~ 6882118 (-) True LOC110531366
TU875271 other upstream 27622 8221531 ~ 8252755 (-) True LOC118936684
TU875321 other upstream 84908 8278817 ~ 8283324 (-) True LOC110531377
TU875757 other upstream 788559 8982468 ~ 8990706 (-) False G768780
TU875758 other upstream 788559 8982468 ~ 8990706 (-) True G768780
TU877415 other upstream 2180800 10374709 ~ 10375854 (-) False G770225

Expression Profile