RNA id: TU875722



Basic Information


Item Value
RNA id TU875722
length 225
lncRNA type inter_gene
GC content 0.29
exon number 2
gene id G768755
representative True

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 8924908 ~ 8925272 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TTTACATATCCTTACATATCCTTACATATCCTTACATATCCTTACATATCTTTACATATCCTTACATATCCTTACATATCCTTACATATCCTTACATATCTTTACATATCCTTACATATCCTTACATATCCTTACATATCCTTACATATCCTTACATATCTTTACATATCCTTACATATCCTTACATATCCTTACATATCCTTACATATCCTTACACATCCTTAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU875682 lncRNA downstream 1214 8916025 ~ 8923694 (-) False G768725
TU875677 lncRNA downstream 1647 8921929 ~ 8923261 (-) False G768725
TU875659 lncRNA downstream 1647 8921960 ~ 8923261 (-) False G768725
TU875662 lncRNA downstream 1647 8921960 ~ 8923261 (-) False G768725
TU875664 lncRNA downstream 1647 8921960 ~ 8923261 (-) False G768725
TU875735 lncRNA upstream 25508 8950780 ~ 8951277 (-) True G768767
TU875763 lncRNA upstream 75227 9000499 ~ 9000776 (-) True G768785
TU875767 lncRNA upstream 78181 9003453 ~ 9004491 (-) True G768788
TU875789 lncRNA upstream 124620 9049892 ~ 9051345 (-) True G768810
TU875798 lncRNA upstream 155055 9080327 ~ 9080573 (-) True G768819
LOC118966157 mRNA downstream 207570 8702038 ~ 8717338 (-) True LOC118966157
XM_036987251.1 mRNA downstream 239937 8639499 ~ 8684971 (-) False LOC110532904
XM_036987252.1 mRNA downstream 239937 8639499 ~ 8684971 (-) True LOC110532904
XM_036987250.1 mRNA downstream 239938 8639499 ~ 8684970 (-) False LOC110532904
XM_036987248.1 mRNA downstream 344332 8566556 ~ 8580576 (-) True nagk
XM_036987260.1 mRNA upstream 98441 9023713 ~ 9077362 (-) False phka1a
XM_036987258.1 mRNA upstream 98441 9023713 ~ 9077363 (-) False phka1a
XM_036987261.1 mRNA upstream 98441 9023713 ~ 9077363 (-) True phka1a
NM_001124464.1 mRNA upstream 158104 9083376 ~ 9087297 (-) False leap2
XM_021614611.2 mRNA upstream 178962 9104234 ~ 9107459 (-) True bmp15
TU875321 other downstream 641584 8278817 ~ 8283324 (-) True LOC110531377
TU875271 other downstream 672153 8221531 ~ 8252755 (-) True LOC118936684
TU875250 other downstream 733010 8189443 ~ 8191898 (-) True G768390
TU874434 other downstream 810838 8112588 ~ 8114070 (-) True LOC110510419
TU873506 other downstream 1673833 7245644 ~ 7251075 (-) True G767056
TU875757 other upstream 57196 8982468 ~ 8990706 (-) False G768780
TU875758 other upstream 57196 8982468 ~ 8990706 (-) True G768780
TU877415 other upstream 1449437 10374709 ~ 10375854 (-) False G770225
TU877419 other upstream 1449437 10374709 ~ 10375854 (-) True G770225
TU877807 other upstream 2047101 10972373 ~ 10974413 (-) True G770549

Expression Profile