RNA id: TU875958



Basic Information


Item Value
RNA id TU875958
length 247
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G768960
representative True

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 9357913 ~ 9358159 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TTATTGGGTCGGCTTCATTCACATTATTGGGTCAGCTTCAGATCACATTATTGGGTCAGCCTAACATTCACATTATTGGGTCAGCTTCATTCACATTATTGGGTCAGCTTCAGATCACATTATTGGGTCAGCCTAACATTCACATTATTGGGTCAGCTTCAGATCACATTATTGGGTCAGCTTCATTCACATTATTGGGTCAGCCTCAGATCACATTATTGGGTCAGCTTCAGATCACATTATTGGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU875955 lncRNA downstream 3991 9353622 ~ 9353922 (-) True G768957
TU875935 lncRNA downstream 38576 9319037 ~ 9319337 (-) True G768937
TU875899 lncRNA downstream 49922 9256004 ~ 9307991 (-) True G768905
TU875916 lncRNA downstream 63273 9292832 ~ 9294640 (-) True G768920
TU875905 lncRNA downstream 96260 9260587 ~ 9261653 (-) True G768911
TU875973 lncRNA upstream 32316 9390475 ~ 9391160 (-) True G768975
TU875988 lncRNA upstream 49955 9408114 ~ 9408404 (-) True G768990
TU875997 lncRNA upstream 61739 9419898 ~ 9420204 (-) True G768999
TU875998 lncRNA upstream 74850 9433009 ~ 9433229 (-) True G769000
TU876089 lncRNA upstream 86331 9444490 ~ 9544759 (-) True G769070
XM_036987268.1 mRNA downstream 9655 9294764 ~ 9348258 (-) True LOC110531417
XM_021614611.2 mRNA downstream 250454 9104234 ~ 9107459 (-) True bmp15
NM_001124464.1 mRNA downstream 270616 9083376 ~ 9087297 (-) False leap2
XM_036987258.1 mRNA downstream 280550 9023713 ~ 9077363 (-) False phka1a
XM_021614628.2 mRNA upstream 625333 9983492 ~ 9988450 (-) True LOC110531429
XR_005053162.1 mRNA upstream 759601 10117760 ~ 10130445 (-) False LOC118965989
XR_005053163.1 mRNA upstream 777370 10135529 ~ 10137709 (-) True LOC118965990
XM_036987277.1 mRNA upstream 782464 10140623 ~ 10213284 (-) False LOC110531425
XM_036987278.1 mRNA upstream 782464 10140623 ~ 10213284 (-) False LOC110531425
TU875757 other downstream 367207 8982468 ~ 8990706 (-) False G768780
TU875758 other downstream 367207 8982468 ~ 8990706 (-) True G768780
TU875321 other downstream 1074589 8278817 ~ 8283324 (-) True LOC110531377
TU875271 other downstream 1105158 8221531 ~ 8252755 (-) True LOC118936684
TU875250 other downstream 1166015 8189443 ~ 8191898 (-) True G768390
TU877415 other upstream 1016550 10374709 ~ 10375854 (-) False G770225
TU877419 other upstream 1016550 10374709 ~ 10375854 (-) True G770225
TU877807 other upstream 1614214 10972373 ~ 10974413 (-) True G770549
TU877895 other upstream 1749669 11107828 ~ 11108159 (-) True G770627
TU878909 other upstream 2270457 11628616 ~ 11629588 (-) True G771457

Expression Profile