Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU877250 |
| length | 221 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 1 |
| gene id | G770098 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 10019445 ~ 10019665 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU877233 | lncRNA | downstream | 44337 | 9974210 ~ 9975108 (-) | True | G770082 |
| TU877231 | lncRNA | downstream | 51546 | 9967696 ~ 9967899 (-) | True | G770080 |
| TU877225 | lncRNA | downstream | 57975 | 9961247 ~ 9961470 (-) | True | G770076 |
| TU877220 | lncRNA | downstream | 62691 | 9956458 ~ 9956754 (-) | True | G770071 |
| TU877171 | lncRNA | downstream | 65165 | 9951244 ~ 9954280 (-) | True | G770029 |
| TU877251 | lncRNA | upstream | 372 | 10020037 ~ 10020236 (-) | True | G770099 |
| TU877280 | lncRNA | upstream | 18525 | 10038190 ~ 10038756 (-) | False | G770118 |
| TU877281 | lncRNA | upstream | 18525 | 10038190 ~ 10038756 (-) | True | G770118 |
| TU877302 | lncRNA | upstream | 80238 | 10099903 ~ 10100534 (-) | True | G770139 |
| TU877303 | lncRNA | upstream | 80977 | 10100642 ~ 10100846 (-) | True | G770140 |
| XM_021614628.2 | mRNA | downstream | 30995 | 9983492 ~ 9988450 (-) | True | LOC110531429 |
| XM_036987268.1 | mRNA | downstream | 671187 | 9294764 ~ 9348258 (-) | True | LOC110531417 |
| XM_021614611.2 | mRNA | downstream | 911986 | 9104234 ~ 9107459 (-) | True | bmp15 |
| NM_001124464.1 | mRNA | downstream | 932148 | 9083376 ~ 9087297 (-) | False | leap2 |
| XM_036987258.1 | mRNA | downstream | 942082 | 9023713 ~ 9077363 (-) | False | phka1a |
| XR_005053162.1 | mRNA | upstream | 98095 | 10117760 ~ 10130445 (-) | False | LOC118965989 |
| XR_005053163.1 | mRNA | upstream | 115864 | 10135529 ~ 10137709 (-) | True | LOC118965990 |
| XM_036987277.1 | mRNA | upstream | 120958 | 10140623 ~ 10213284 (-) | False | LOC110531425 |
| XM_036987278.1 | mRNA | upstream | 120958 | 10140623 ~ 10213284 (-) | False | LOC110531425 |
| XM_036987279.1 | mRNA | upstream | 120958 | 10140623 ~ 10213284 (-) | False | LOC110531425 |
| TU875757 | other | downstream | 1028739 | 8982468 ~ 8990706 (-) | False | G768780 |
| TU875758 | other | downstream | 1028739 | 8982468 ~ 8990706 (-) | True | G768780 |
| TU875321 | other | downstream | 1736121 | 8278817 ~ 8283324 (-) | True | LOC110531377 |
| TU875271 | other | downstream | 1766690 | 8221531 ~ 8252755 (-) | True | LOC118936684 |
| TU875250 | other | downstream | 1827547 | 8189443 ~ 8191898 (-) | True | G768390 |
| TU877415 | other | upstream | 355044 | 10374709 ~ 10375854 (-) | False | G770225 |
| TU877419 | other | upstream | 355044 | 10374709 ~ 10375854 (-) | True | G770225 |
| TU877807 | other | upstream | 952708 | 10972373 ~ 10974413 (-) | True | G770549 |
| TU877895 | other | upstream | 1088163 | 11107828 ~ 11108159 (-) | True | G770627 |
| TU878909 | other | upstream | 1608951 | 11628616 ~ 11629588 (-) | True | G771457 |
