RNA id: TU877874



Basic Information


Item Value
RNA id TU877874
length 266
lncRNA type antisense_over
GC content 0.59
exon number 1
gene id G770607
representative True

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 11079038 ~ 11079303 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CCCTTCCTTCCTGGTCCCCCAGGGATGCCGTTTCTTCCCCCGGGGCCCGGCGGTCCCAGAAGGCCCCTGAGTCCTGATGATCCATCCCCTCCTGGTTGTCCTGGTTGTCCCTTCCTCCCAGTTGGGCCTGGGAAGCCCGTGTCACCTCTGGCTCCTTTTAAACCGGGGTAGCCTGGGTGGGGATCGGGAGGACACAGTCAGACACAACACTTTCCTCTGGGAATCAAAGGAGTAcattcaatgacattcaaaaAGGGAGGGAGAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU877865 lncRNA downstream 1377 11066181 ~ 11077661 (-) True G770601
TU877788 lncRNA downstream 133709 10944859 ~ 10945329 (-) True G770533
TU877776 lncRNA downstream 151664 10927139 ~ 10927374 (-) True G770525
TU877769 lncRNA downstream 164119 10914308 ~ 10914919 (-) True G770518
TU877719 lncRNA downstream 266022 10810583 ~ 10813016 (-) True G770470
TU877875 lncRNA upstream 1760 11081063 ~ 11081485 (-) True G770608
TU877880 lncRNA upstream 7750 11087053 ~ 11087292 (-) True G770613
TU877881 lncRNA upstream 8014 11087317 ~ 11087561 (-) True G770614
TU877883 lncRNA upstream 11017 11090320 ~ 11090780 (-) True G770616
TU877886 lncRNA upstream 16636 11095939 ~ 11096243 (-) True G770619
XM_036987301.1 mRNA downstream 193678 10791193 ~ 10885360 (-) True LOC110531422
XM_036987296.1 mRNA downstream 383475 10671988 ~ 10695563 (-) True LOC110531427
XR_005053173.1 mRNA downstream 414474 10661390 ~ 10664564 (-) True LOC118965993
XR_005053168.1 mRNA downstream 811335 10266070 ~ 10267703 (-) False LOC118965991
XM_036987318.1 mRNA upstream 416239 11495542 ~ 11535435 (-) False LOC110531444
XM_036987315.1 mRNA upstream 416239 11495542 ~ 11535436 (-) False LOC110531444
XM_036987316.1 mRNA upstream 416239 11495542 ~ 11535436 (-) False LOC110531444
XM_036987313.1 mRNA upstream 416239 11495542 ~ 11535437 (-) False LOC110531444
XM_036987317.1 mRNA upstream 416239 11495542 ~ 11535437 (-) False LOC110531444
TU877807 other downstream 104625 10972373 ~ 10974413 (-) True G770549
TU877415 other downstream 703184 10374709 ~ 10375854 (-) False G770225
TU877419 other downstream 703184 10374709 ~ 10375854 (-) True G770225
TU875757 other downstream 2088332 8982468 ~ 8990706 (-) False G768780
TU877895 other upstream 28525 11107828 ~ 11108159 (-) True G770627
TU878909 other upstream 549313 11628616 ~ 11629588 (-) True G771457
TU878914 other upstream 619096 11698399 ~ 11701583 (-) False LOC110531452
TU878915 other upstream 619096 11698399 ~ 11701583 (-) True LOC110531452
TU878944 other upstream 679935 11759238 ~ 11776612 (-) False LOC110532912

Expression Profile