Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU879232 |
| length | 537 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G771727 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 12188241 ~ 12188777 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU879231 | lncRNA | downstream | 332 | 12187671 ~ 12187909 (-) | True | G771726 |
| TU879230 | lncRNA | downstream | 815 | 12187080 ~ 12187426 (-) | True | G771725 |
| TU879228 | lncRNA | downstream | 2506 | 12185486 ~ 12185735 (-) | True | trnas-uga-2 |
| TU879200 | lncRNA | downstream | 15669 | 12138383 ~ 12172572 (-) | True | G771697 |
| TU879159 | lncRNA | downstream | 59871 | 12092145 ~ 12128370 (-) | False | LOC110531465 |
| TU879233 | lncRNA | upstream | 2861 | 12191638 ~ 12191994 (-) | True | G771728 |
| TU879235 | lncRNA | upstream | 5717 | 12194494 ~ 12194703 (-) | True | G771730 |
| TU879237 | lncRNA | upstream | 6554 | 12195331 ~ 12197759 (-) | True | G771732 |
| TU879241 | lncRNA | upstream | 25246 | 12214023 ~ 12235651 (-) | True | G771735 |
| TU879257 | lncRNA | upstream | 47133 | 12235910 ~ 12236188 (-) | True | G771751 |
| trnas-uga-2 | mRNA | downstream | 2528 | 12185632 ~ 12185713 (-) | False | trnas-uga-2 |
| XM_021614669.2 | mRNA | downstream | 35226 | 12147494 ~ 12153015 (-) | True | LOC110531459 |
| XM_036987352.1 | mRNA | downstream | 35231 | 12147494 ~ 12153010 (-) | False | LOC110531459 |
| XM_036987357.1 | mRNA | downstream | 43455 | 12126227 ~ 12144786 (-) | False | LOC110531465 |
| XM_021614675.2 | mRNA | downstream | 43456 | 12126227 ~ 12144785 (-) | False | LOC110531465 |
| trnaw-cca-4 | mRNA | upstream | 9930 | 12198707 ~ 12198778 (-) | True | trnaw-cca-4 |
| XM_021614680.2 | mRNA | upstream | 247563 | 12436340 ~ 12441768 (-) | True | sox19b |
| XM_021614681.2 | mRNA | upstream | 280028 | 12468805 ~ 12479392 (-) | True | LOC110531476 |
| XR_005053463.1 | mRNA | upstream | 282199 | 12470976 ~ 12471118 (-) | True | LOC118966197 |
| XR_005053466.1 | mRNA | upstream | 284891 | 12473668 ~ 12473792 (-) | True | LOC118966200 |
| TU879101 | other | downstream | 216887 | 11970904 ~ 11971354 (-) | True | G771614 |
| TU879007 | other | downstream | 299526 | 11871488 ~ 11888715 (-) | True | G771540 |
| TU878946 | other | downstream | 399672 | 11785781 ~ 11788569 (-) | True | LOC110532912 |
| TU878944 | other | downstream | 411629 | 11759238 ~ 11776612 (-) | False | LOC110532912 |
| TU878915 | other | downstream | 486658 | 11698399 ~ 11701583 (-) | True | LOC110531452 |
| TU880578 | other | upstream | 805492 | 12994269 ~ 12996410 (-) | False | G772877 |
| TU880579 | other | upstream | 805492 | 12994269 ~ 12996410 (-) | True | G772877 |
| TU880902 | other | upstream | 1401476 | 13590253 ~ 13592088 (-) | True | G773163 |
| TU880908 | other | upstream | 1508402 | 13697179 ~ 13699328 (-) | True | G773168 |
| TU881137 | other | upstream | 1791551 | 13980328 ~ 13987582 (-) | True | LOC110531538 |
