Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU879294 |
| length | 290 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G771788 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 12314199 ~ 12314488 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU879292 | lncRNA | downstream | 3542 | 12310426 ~ 12310657 (-) | True | G771786 |
| TU879291 | lncRNA | downstream | 4419 | 12309488 ~ 12309780 (-) | True | G771785 |
| TU879290 | lncRNA | downstream | 4859 | 12308780 ~ 12309340 (-) | True | G771784 |
| TU879288 | lncRNA | downstream | 8960 | 12305000 ~ 12305239 (-) | True | G771782 |
| TU879287 | lncRNA | downstream | 9206 | 12304274 ~ 12304993 (-) | True | G771781 |
| TU879304 | lncRNA | upstream | 12548 | 12327036 ~ 12338987 (-) | False | G771797 |
| TU879305 | lncRNA | upstream | 12548 | 12327036 ~ 12338987 (-) | True | G771797 |
| TU879306 | lncRNA | upstream | 12905 | 12327393 ~ 12361900 (-) | True | G771798 |
| TU879308 | lncRNA | upstream | 23959 | 12338447 ~ 12344607 (-) | True | G771799 |
| TU879340 | lncRNA | upstream | 87310 | 12401798 ~ 12402245 (-) | True | G771829 |
| trnaw-cca-4 | mRNA | downstream | 115421 | 12198707 ~ 12198778 (-) | True | trnaw-cca-4 |
| trnas-uga-2 | mRNA | downstream | 128486 | 12185632 ~ 12185713 (-) | False | trnas-uga-2 |
| XM_021614669.2 | mRNA | downstream | 161184 | 12147494 ~ 12153015 (-) | True | LOC110531459 |
| XM_036987352.1 | mRNA | downstream | 161189 | 12147494 ~ 12153010 (-) | False | LOC110531459 |
| XM_036987357.1 | mRNA | downstream | 169413 | 12126227 ~ 12144786 (-) | False | LOC110531465 |
| XM_021614680.2 | mRNA | upstream | 121852 | 12436340 ~ 12441768 (-) | True | sox19b |
| XM_021614681.2 | mRNA | upstream | 154317 | 12468805 ~ 12479392 (-) | True | LOC110531476 |
| XR_005053463.1 | mRNA | upstream | 156488 | 12470976 ~ 12471118 (-) | True | LOC118966197 |
| XR_005053466.1 | mRNA | upstream | 159180 | 12473668 ~ 12473792 (-) | True | LOC118966200 |
| XR_005053465.1 | mRNA | upstream | 161019 | 12475507 ~ 12475649 (-) | True | LOC118966199 |
| TU879101 | other | downstream | 342845 | 11970904 ~ 11971354 (-) | True | G771614 |
| TU879007 | other | downstream | 425484 | 11871488 ~ 11888715 (-) | True | G771540 |
| TU878946 | other | downstream | 525630 | 11785781 ~ 11788569 (-) | True | LOC110532912 |
| TU878944 | other | downstream | 537587 | 11759238 ~ 11776612 (-) | False | LOC110532912 |
| TU878915 | other | downstream | 612616 | 11698399 ~ 11701583 (-) | True | LOC110531452 |
| TU880578 | other | upstream | 679781 | 12994269 ~ 12996410 (-) | False | G772877 |
| TU880579 | other | upstream | 679781 | 12994269 ~ 12996410 (-) | True | G772877 |
| TU880902 | other | upstream | 1275765 | 13590253 ~ 13592088 (-) | True | G773163 |
| TU880908 | other | upstream | 1382691 | 13697179 ~ 13699328 (-) | True | G773168 |
| TU881137 | other | upstream | 1665840 | 13980328 ~ 13987582 (-) | True | LOC110531538 |
