Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU880271 |
| length | 215 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 1 |
| gene id | G772599 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 12462392 ~ 12462606 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU879351 | lncRNA | downstream | 45548 | 12415730 ~ 12416844 (-) | True | G771840 |
| TU879347 | lncRNA | downstream | 48597 | 12412512 ~ 12413795 (-) | True | G771836 |
| TU879341 | lncRNA | downstream | 59256 | 12402395 ~ 12403136 (-) | True | G771830 |
| TU879340 | lncRNA | downstream | 60147 | 12401798 ~ 12402245 (-) | True | G771829 |
| TU879306 | lncRNA | downstream | 100492 | 12327393 ~ 12361900 (-) | True | G771798 |
| TU880280 | lncRNA | upstream | 18853 | 12481459 ~ 12481903 (-) | True | G772608 |
| TU880292 | lncRNA | upstream | 46615 | 12509221 ~ 12509435 (-) | True | G772619 |
| TU880293 | lncRNA | upstream | 47120 | 12509726 ~ 12509981 (-) | True | G772620 |
| TU880294 | lncRNA | upstream | 47443 | 12510049 ~ 12510423 (-) | True | G772621 |
| TU880295 | lncRNA | upstream | 48250 | 12510856 ~ 12511070 (-) | True | G772622 |
| XM_021614680.2 | mRNA | downstream | 20624 | 12436340 ~ 12441768 (-) | True | sox19b |
| trnaw-cca-4 | mRNA | downstream | 263614 | 12198707 ~ 12198778 (-) | True | trnaw-cca-4 |
| trnas-uga-2 | mRNA | downstream | 276679 | 12185632 ~ 12185713 (-) | False | trnas-uga-2 |
| XM_021614669.2 | mRNA | downstream | 309377 | 12147494 ~ 12153015 (-) | True | LOC110531459 |
| XM_036987352.1 | mRNA | downstream | 309382 | 12147494 ~ 12153010 (-) | False | LOC110531459 |
| XM_021614681.2 | mRNA | upstream | 6199 | 12468805 ~ 12479392 (-) | True | LOC110531476 |
| XR_005053463.1 | mRNA | upstream | 8370 | 12470976 ~ 12471118 (-) | True | LOC118966197 |
| XR_005053466.1 | mRNA | upstream | 11062 | 12473668 ~ 12473792 (-) | True | LOC118966200 |
| XR_005053465.1 | mRNA | upstream | 12901 | 12475507 ~ 12475649 (-) | True | LOC118966199 |
| XM_021614682.2 | mRNA | upstream | 22155 | 12484761 ~ 12507741 (-) | True | senp3b |
| TU879101 | other | downstream | 491038 | 11970904 ~ 11971354 (-) | True | G771614 |
| TU879007 | other | downstream | 573677 | 11871488 ~ 11888715 (-) | True | G771540 |
| TU878946 | other | downstream | 673823 | 11785781 ~ 11788569 (-) | True | LOC110532912 |
| TU878944 | other | downstream | 685780 | 11759238 ~ 11776612 (-) | False | LOC110532912 |
| TU878915 | other | downstream | 760809 | 11698399 ~ 11701583 (-) | True | LOC110531452 |
| TU880578 | other | upstream | 531663 | 12994269 ~ 12996410 (-) | False | G772877 |
| TU880579 | other | upstream | 531663 | 12994269 ~ 12996410 (-) | True | G772877 |
| TU880902 | other | upstream | 1127647 | 13590253 ~ 13592088 (-) | True | G773163 |
| TU880908 | other | upstream | 1234573 | 13697179 ~ 13699328 (-) | True | G773168 |
| TU881137 | other | upstream | 1517722 | 13980328 ~ 13987582 (-) | True | LOC110531538 |
