Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU880641 |
| length | 270 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G772924 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 13102029 ~ 13102298 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU880630 | lncRNA | downstream | 17104 | 13079772 ~ 13084925 (-) | True | G772914 |
| TU880562 | lncRNA | downstream | 90015 | 12963423 ~ 13012014 (-) | False | G772863 |
| TU880563 | lncRNA | downstream | 90015 | 12963423 ~ 13012014 (-) | True | G772863 |
| TU880553 | lncRNA | downstream | 160022 | 12939794 ~ 12942007 (-) | True | G772857 |
| TU880489 | lncRNA | downstream | 256275 | 12845531 ~ 12845754 (-) | True | G772803 |
| TU880652 | lncRNA | upstream | 9604 | 13111902 ~ 13112213 (-) | True | G772934 |
| TU880678 | lncRNA | upstream | 24030 | 13126328 ~ 13132967 (-) | True | LOC118966159 |
| TU880667 | lncRNA | upstream | 95206 | 13197504 ~ 13199073 (-) | True | G772946 |
| TU880721 | lncRNA | upstream | 124665 | 13226963 ~ 13227177 (-) | True | G772997 |
| TU880725 | lncRNA | upstream | 128748 | 13231046 ~ 13231269 (-) | True | G773001 |
| XM_021617078.2 | mRNA | downstream | 87570 | 13012712 ~ 13014459 (-) | True | LOC110532921 |
| XM_021614711.2 | mRNA | downstream | 118929 | 12966133 ~ 12983100 (-) | True | ripk3 |
| XM_021614696.2 | mRNA | downstream | 225583 | 12856566 ~ 12876446 (-) | True | LOC110531492 |
| XM_036987371.1 | mRNA | downstream | 233738 | 12856566 ~ 12868291 (-) | False | LOC110531492 |
| trnaa-ugc-29 | mRNA | downstream | 448240 | 12653719 ~ 12653789 (-) | True | trnaa-ugc-29 |
| XM_036989250.1 | mRNA | upstream | 17699 | 13119997 ~ 13139049 (-) | False | LOC118966159 |
| XM_021614714.2 | mRNA | upstream | 109217 | 13211515 ~ 13217001 (-) | True | LOC110531504 |
| XM_036989186.1 | mRNA | upstream | 247822 | 13350120 ~ 13367152 (-) | False | LOC110531502 |
| XM_036989187.1 | mRNA | upstream | 247822 | 13350120 ~ 13367176 (-) | True | LOC110531502 |
| XM_036989160.1 | mRNA | upstream | 340156 | 13442454 ~ 13472851 (-) | False | sb:cb1081 |
| TU880578 | other | downstream | 105619 | 12994269 ~ 12996410 (-) | False | G772877 |
| TU880579 | other | downstream | 105619 | 12994269 ~ 12996410 (-) | True | G772877 |
| TU879101 | other | downstream | 1130675 | 11970904 ~ 11971354 (-) | True | G771614 |
| TU879007 | other | downstream | 1213314 | 11871488 ~ 11888715 (-) | True | G771540 |
| TU878946 | other | downstream | 1313460 | 11785781 ~ 11788569 (-) | True | LOC110532912 |
| TU880902 | other | upstream | 487955 | 13590253 ~ 13592088 (-) | True | G773163 |
| TU880908 | other | upstream | 594881 | 13697179 ~ 13699328 (-) | True | G773168 |
| TU881137 | other | upstream | 878030 | 13980328 ~ 13987582 (-) | True | LOC110531538 |
| TU882202 | other | upstream | 1147103 | 14249401 ~ 14254157 (-) | True | LOC118966145 |
| TU882399 | other | upstream | 1621756 | 14724054 ~ 14724522 (-) | True | G774427 |
