RNA id: TU882191



Basic Information


Item Value
RNA id TU882191
length 244
lncRNA type read_through
GC content 0.60
exon number 2
gene id G774246
representative True

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 14371346 ~ 14371628 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GCCTCACCTCCTGACTGCTGTCTGGGGAGGTTGTTGTGGGTGGAGGCTCCTGACTGCTGACTGGGGAGGTTGTTGTGGGTGGAGGCTCCTGACTGCTGACTGGGGAGGTTGTTGTGGGTGGAGGCTCCTGACTGCTGACTGGGGAGGTTGTTGTGGGTGGAGGCTCCAGGCTGTCTctcagagtgagggagagaggtccTCCAGGCATCTCCAACACATGAGCTTTCTGAAGTACCCTCTCCTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU882242 lncRNA downstream 10171 14360955 ~ 14361175 (-) True G774294
TU882233 lncRNA downstream 30621 14340260 ~ 14340725 (-) True G774285
TU882229 lncRNA downstream 34542 14336519 ~ 14336804 (-) True G774281
TU882174 lncRNA downstream 39444 14311460 ~ 14331902 (-) False LOC110531554
TU882109 lncRNA downstream 248155 14114285 ~ 14123191 (-) True G774181
TU882192 lncRNA upstream 4694 14376322 ~ 14376961 (-) True G774247
TU882244 lncRNA upstream 7271 14378899 ~ 14379103 (-) True G774296
TU882245 lncRNA upstream 7883 14379511 ~ 14379760 (-) True G774297
TU882248 lncRNA upstream 14677 14386305 ~ 14386559 (-) True G774300
TU882179 lncRNA upstream 24078 14395706 ~ 14398970 (-) True LOC110531554
XM_036987374.1 mRNA downstream 60199 14294361 ~ 14311147 (-) False LOC110531552
XM_036987375.1 mRNA downstream 60199 14294361 ~ 14311147 (-) True LOC110531552
XM_021614784.2 mRNA downstream 60619 14294361 ~ 14310727 (-) False LOC110531552
XM_021614793.2 mRNA upstream 25962 14397590 ~ 14405052 (-) False LOC110531554
XM_036987383.1 mRNA upstream 70855 14442483 ~ 14446637 (-) False LOC110531560
XR_005053180.1 mRNA upstream 70908 14442536 ~ 14446637 (-) False LOC110531560
XM_036987384.1 mRNA upstream 71347 14442975 ~ 14446638 (-) False LOC110531560
XM_036987385.1 mRNA upstream 71347 14442975 ~ 14446639 (-) True LOC110531560
TU882202 other downstream 117189 14249401 ~ 14254157 (-) True LOC118966145
TU881137 other downstream 383764 13980328 ~ 13987582 (-) True LOC110531538
TU880908 other downstream 672018 13697179 ~ 13699328 (-) True G773168
TU880902 other downstream 779258 13590253 ~ 13592088 (-) True G773163
TU880579 other downstream 1374936 12994269 ~ 12996410 (-) True G772877
TU882399 other upstream 352426 14724054 ~ 14724522 (-) True G774427
TU882572 other upstream 866430 15238058 ~ 15253973 (-) True G774562
TU882761 other upstream 980679 15352307 ~ 15361319 (-) True G774702
TU883038 other upstream 1253574 15625202 ~ 15625920 (-) True G774954
TU883145 other upstream 1410729 15782357 ~ 15787606 (-) False LOC110531603

Expression Profile