RNA id: TU882244



Basic Information


Item Value
RNA id TU882244
length 205
lncRNA type intronic
GC content 0.53
exon number 1
gene id G774296
representative True

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 14378899 ~ 14379103 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ctacaacgtctacatcatccacaagtatgaccaccaccggtgcagcgagaccctctacaaagtctacatcatccacaagtatgaccaccaccggtgcagcgagaccctctacaacgtctacatcatccacaagtatgaccaccaccggtgcagcgagaccctctacaacgtctacatcatccacaagtatgaccaccaccggtgc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU882192 lncRNA downstream 1938 14376322 ~ 14376961 (-) True G774247
TU882191 lncRNA downstream 7271 14371346 ~ 14371628 (-) True G774246
TU882242 lncRNA downstream 17724 14360955 ~ 14361175 (-) True G774294
TU882233 lncRNA downstream 38174 14340260 ~ 14340725 (-) True G774285
TU882229 lncRNA downstream 42095 14336519 ~ 14336804 (-) True G774281
TU882245 lncRNA upstream 408 14379511 ~ 14379760 (-) True G774297
TU882248 lncRNA upstream 7202 14386305 ~ 14386559 (-) True G774300
TU882179 lncRNA upstream 16603 14395706 ~ 14398970 (-) True LOC110531554
TU882270 lncRNA upstream 29174 14408277 ~ 14408578 (-) True G774314
TU882272 lncRNA upstream 32243 14411346 ~ 14411554 (-) True G774316
XM_036987374.1 mRNA downstream 67752 14294361 ~ 14311147 (-) False LOC110531552
XM_036987375.1 mRNA downstream 67752 14294361 ~ 14311147 (-) True LOC110531552
XM_021614784.2 mRNA downstream 68172 14294361 ~ 14310727 (-) False LOC110531552
XM_021614793.2 mRNA upstream 18487 14397590 ~ 14405052 (-) False LOC110531554
XM_036987383.1 mRNA upstream 63380 14442483 ~ 14446637 (-) False LOC110531560
XR_005053180.1 mRNA upstream 63433 14442536 ~ 14446637 (-) False LOC110531560
XM_036987384.1 mRNA upstream 63872 14442975 ~ 14446638 (-) False LOC110531560
XM_036987385.1 mRNA upstream 63872 14442975 ~ 14446639 (-) True LOC110531560
TU882202 other downstream 124742 14249401 ~ 14254157 (-) True LOC118966145
TU881137 other downstream 391317 13980328 ~ 13987582 (-) True LOC110531538
TU880908 other downstream 679571 13697179 ~ 13699328 (-) True G773168
TU880902 other downstream 786811 13590253 ~ 13592088 (-) True G773163
TU880579 other downstream 1382489 12994269 ~ 12996410 (-) True G772877
TU882399 other upstream 344951 14724054 ~ 14724522 (-) True G774427
TU882572 other upstream 858955 15238058 ~ 15253973 (-) True G774562
TU882761 other upstream 973204 15352307 ~ 15361319 (-) True G774702
TU883038 other upstream 1246099 15625202 ~ 15625920 (-) True G774954
TU883145 other upstream 1403254 15782357 ~ 15787606 (-) False LOC110531603

Expression Profile