RNA id: TU882248



Basic Information


Item Value
RNA id TU882248
length 255
lncRNA type intronic
GC content 0.41
exon number 1
gene id G774300
representative True

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 14386305 ~ 14386559 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ctttaaacaccttgtagagtccacgcccctGATAGACTGAGGCTGTTCTTAGGGCAAAAGGGGgaaggtgcaactcaatattaggaaggtgttcttactgttttgtacactcagtgtataacgaGGAAAACTGCTGATACACAACCAATTGTCCTCATATGTATCTATGGCACTGAGTAGAACATGTCCTGTACAAAGTGTACAAATATGCCTCTAGTATATAGTACATGCAAGACTGCTAATAAAGTGGCAATA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU882245 lncRNA downstream 6545 14379511 ~ 14379760 (-) True G774297
TU882244 lncRNA downstream 7202 14378899 ~ 14379103 (-) True G774296
TU882192 lncRNA downstream 9344 14376322 ~ 14376961 (-) True G774247
TU882191 lncRNA downstream 14677 14371346 ~ 14371628 (-) True G774246
TU882242 lncRNA downstream 25130 14360955 ~ 14361175 (-) True G774294
TU882179 lncRNA upstream 9147 14395706 ~ 14398970 (-) True LOC110531554
TU882270 lncRNA upstream 21718 14408277 ~ 14408578 (-) True G774314
TU882272 lncRNA upstream 24787 14411346 ~ 14411554 (-) True G774316
TU882273 lncRNA upstream 26079 14412638 ~ 14412914 (-) True G774317
TU882287 lncRNA upstream 45864 14432423 ~ 14432636 (-) True G774331
XM_036987374.1 mRNA downstream 75158 14294361 ~ 14311147 (-) False LOC110531552
XM_036987375.1 mRNA downstream 75158 14294361 ~ 14311147 (-) True LOC110531552
XM_021614784.2 mRNA downstream 75578 14294361 ~ 14310727 (-) False LOC110531552
XM_021614793.2 mRNA upstream 11031 14397590 ~ 14405052 (-) False LOC110531554
XM_036987383.1 mRNA upstream 55924 14442483 ~ 14446637 (-) False LOC110531560
XR_005053180.1 mRNA upstream 55977 14442536 ~ 14446637 (-) False LOC110531560
XM_036987384.1 mRNA upstream 56416 14442975 ~ 14446638 (-) False LOC110531560
XM_036987385.1 mRNA upstream 56416 14442975 ~ 14446639 (-) True LOC110531560
TU882202 other downstream 132148 14249401 ~ 14254157 (-) True LOC118966145
TU881137 other downstream 398723 13980328 ~ 13987582 (-) True LOC110531538
TU880908 other downstream 686977 13697179 ~ 13699328 (-) True G773168
TU880902 other downstream 794217 13590253 ~ 13592088 (-) True G773163
TU880579 other downstream 1389895 12994269 ~ 12996410 (-) True G772877
TU882399 other upstream 337495 14724054 ~ 14724522 (-) True G774427
TU882572 other upstream 851499 15238058 ~ 15253973 (-) True G774562
TU882761 other upstream 965748 15352307 ~ 15361319 (-) True G774702
TU883038 other upstream 1238643 15625202 ~ 15625920 (-) True G774954
TU883145 other upstream 1395798 15782357 ~ 15787606 (-) False LOC110531603

Expression Profile