RNA id: TU882476



Basic Information


Item Value
RNA id TU882476
length 351
lncRNA type inter_gene
GC content 0.37
exon number 2
gene id G774485
representative True

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 14827169 ~ 14827561 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


aataaattcattcaaaatcctacaatgtgattttctggattttttttctcattttgtctgtcatagttgaagtgtacctatgatgaaaattacaggcctctctcatctttttaagtgggagaacttgcacaattggtggctgactaaatattttttggccccactgtacatataGCTTGGTACTGACAtggaccctgtatatagcttacataTAGCTTGGTACAGACACggatcctgtatatagcttacataTAGCTTGGTACTCACacggaccctgtatatagcttgcaTATAGCTTGGTACTCAcacagaccctgtatatagcttacactCTCCTGTAttaatttctta

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU882405 lncRNA downstream 84192 14742681 ~ 14742977 (-) True G774432
TU882403 lncRNA downstream 91730 14730868 ~ 14735439 (-) True G774430
TU882400 lncRNA downstream 99468 14724931 ~ 14727701 (-) True G774428
TU882387 lncRNA downstream 109023 14716505 ~ 14718146 (-) True G774419
TU882393 lncRNA downstream 116939 14710024 ~ 14710230 (-) True G774424
TU882483 lncRNA upstream 7062 14834623 ~ 14834887 (-) True G774491
TU882507 lncRNA upstream 36793 14864354 ~ 14876876 (-) True G774513
TU882512 lncRNA upstream 46476 14874037 ~ 14880611 (-) True G774518
TU882576 lncRNA upstream 133729 14961290 ~ 15117567 (-) True G774565
TU882583 lncRNA upstream 137430 14964991 ~ 14966005 (-) True G774568
XM_021614849.2 mRNA downstream 23957 14792676 ~ 14803212 (-) True LOC110531581
XM_021614853.2 mRNA downstream 134802 14687934 ~ 14692367 (-) True LOC110531584
XM_021614855.2 mRNA downstream 180415 14633951 ~ 14646754 (-) True LOC110531585
XM_021614854.2 mRNA downstream 180437 14633925 ~ 14646732 (-) False LOC110531585
XM_036987390.1 mRNA downstream 200354 14531994 ~ 14626815 (-) False LOC110531563
LOC118966000 mRNA upstream 190470 15018031 ~ 15035380 (-) True LOC118966000
XM_021614813.2 mRNA upstream 436605 15264166 ~ 15268722 (-) False LOC110531572
XM_021614811.2 mRNA upstream 436606 15264167 ~ 15268722 (-) False LOC110531572
XR_005053187.1 mRNA upstream 436665 15264226 ~ 15268722 (-) True LOC110531572
XM_021614810.2 mRNA upstream 442629 15270190 ~ 15278916 (-) False LOC110531571
TU882399 other downstream 102647 14724054 ~ 14724522 (-) True G774427
TU882202 other downstream 573012 14249401 ~ 14254157 (-) True LOC118966145
TU881137 other downstream 839587 13980328 ~ 13987582 (-) True LOC110531538
TU880908 other downstream 1127841 13697179 ~ 13699328 (-) True G773168
TU880902 other downstream 1235081 13590253 ~ 13592088 (-) True G773163
TU882572 other upstream 410497 15238058 ~ 15253973 (-) True G774562
TU882761 other upstream 524746 15352307 ~ 15361319 (-) True G774702
TU883038 other upstream 797641 15625202 ~ 15625920 (-) True G774954
TU883145 other upstream 954796 15782357 ~ 15787606 (-) False LOC110531603
TU883264 other upstream 1034759 15862320 ~ 15863834 (-) True G775139

Expression Profile