RNA id: TU883805



Basic Information


Item Value
RNA id TU883805
length 316
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G775594
representative True

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 16034033 ~ 16034348 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ttatacagtatatacattacaacatgttcaTGGTGTTGGGCCACACTTTGTggtgttgttgtttctctgtaattaTTCCGATAAGTCCAGCGTAGATGTTGTGTCACTCCAACACTTTCGTGACTTCTTCTTTGCTTATTAATCAAAAGCGTACAGAGAAATCATGGAAGCGTACAGGTCACCTACTGTACCAGTGTCCACAGtaactcccctcttcctctcccactaTTTTCAATCTCAAAATGAGTGTCAGTTAGTATTttaacttaacctttatttaacttggcaagtcagttaagaacaatttcttatatAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU883802 lncRNA downstream 4391 16028964 ~ 16029642 (-) True G775591
TU883796 lncRNA downstream 18668 16015041 ~ 16015365 (-) True G775585
TU883795 lncRNA downstream 18995 16014756 ~ 16015038 (-) True G775584
TU883786 lncRNA downstream 27775 16005764 ~ 16006258 (-) False G775577
TU883787 lncRNA downstream 27775 16005764 ~ 16006258 (-) True G775577
TU883807 lncRNA upstream 3175 16037523 ~ 16037910 (-) True G775596
TU883810 lncRNA upstream 7620 16041968 ~ 16042333 (-) True G775599
TU883811 lncRNA upstream 8032 16042380 ~ 16042743 (-) True G775600
TU883813 lncRNA upstream 9141 16043489 ~ 16043792 (-) True G775602
TU883814 lncRNA upstream 11264 16045612 ~ 16047293 (-) True G775603
XM_036987432.1 mRNA downstream 4135 15991941 ~ 16029898 (-) False LOC110531610
XM_036987434.1 mRNA downstream 4135 15991941 ~ 16029898 (-) True LOC110531610
XM_036987436.1 mRNA downstream 4153 15991941 ~ 16029880 (-) False LOC110531610
XM_036987435.1 mRNA downstream 4155 15991941 ~ 16029878 (-) False LOC110531610
XM_036987437.1 mRNA downstream 4155 15991941 ~ 16029878 (-) False LOC110531610
XM_021614900.2 mRNA upstream 14396 16048744 ~ 16087030 (-) True LOC110531611
XM_036987438.1 mRNA upstream 61614 16095962 ~ 16117642 (-) False LOC110531612
XM_021614903.2 mRNA upstream 61614 16095962 ~ 16117672 (-) False LOC110531612
XM_021614901.2 mRNA upstream 61614 16095962 ~ 16117696 (-) False LOC110531612
XM_021614902.2 mRNA upstream 61614 16095962 ~ 16117909 (-) False LOC110531612
TU883736 other downstream 120739 15912836 ~ 15913294 (-) True G775532
TU883264 other downstream 170199 15862320 ~ 15863834 (-) True G775139
TU883145 other downstream 246427 15782357 ~ 15787606 (-) False LOC110531603
TU883038 other downstream 408113 15625202 ~ 15625920 (-) True G774954
TU882761 other downstream 672714 15352307 ~ 15361319 (-) True G774702
TU884559 other upstream 792705 16827053 ~ 16828523 (-) False LOC110531626
TU884558 other upstream 792826 16827174 ~ 16828561 (-) False LOC110531626
TU884560 other upstream 792826 16827174 ~ 16828523 (-) True LOC110531626
TU884616 other upstream 831119 16865467 ~ 16866034 (-) True G776294
TU884666 other upstream 975664 17010012 ~ 17014685 (-) True G776340

Expression Profile