Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU885039 |
| length | 1284 |
| lncRNA type | sense_over |
| GC content | 0.43 |
| exon number | 5 |
| gene id | G776678 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 17519943 ~ 17614179 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU885083 | lncRNA | downstream | 38827 | 17477083 ~ 17481116 (-) | True | G776719 |
| TU885079 | lncRNA | downstream | 53148 | 17459171 ~ 17466795 (-) | True | G776715 |
| TU885070 | lncRNA | downstream | 80999 | 17438666 ~ 17438944 (-) | True | G776709 |
| TU885062 | lncRNA | downstream | 104781 | 17414602 ~ 17415162 (-) | True | G776701 |
| TU885034 | lncRNA | downstream | 122890 | 17390176 ~ 17397053 (-) | True | tmem88b |
| TU885170 | lncRNA | upstream | 20730 | 17634909 ~ 17635455 (-) | True | G776798 |
| TU885178 | lncRNA | upstream | 30958 | 17645137 ~ 17645371 (-) | True | G776806 |
| TU885188 | lncRNA | upstream | 42429 | 17656608 ~ 17657040 (-) | True | G776816 |
| TU885189 | lncRNA | upstream | 42877 | 17657056 ~ 17657340 (-) | True | G776817 |
| TU885191 | lncRNA | upstream | 43623 | 17657802 ~ 17658268 (-) | True | G776819 |
| XM_036987491.1 | mRNA | downstream | 88101 | 17402378 ~ 17431842 (-) | False | LOC110532943 |
| XM_036987490.1 | mRNA | downstream | 122715 | 17390090 ~ 17397228 (-) | False | tmem88b |
| XM_021614960.2 | mRNA | downstream | 146295 | 17364983 ~ 17373648 (-) | True | tm4sf5 |
| XM_021614959.2 | mRNA | downstream | 180812 | 17330834 ~ 17339131 (-) | True | LOC110531645 |
| XM_021614958.2 | mRNA | downstream | 180813 | 17330834 ~ 17339130 (-) | False | LOC110531645 |
| XM_036987495.1 | mRNA | upstream | 309891 | 17924070 ~ 17925788 (-) | True | LOC118966010 |
| XM_036987496.1 | mRNA | upstream | 392454 | 18006633 ~ 18129483 (-) | True | LOC110531650 |
| XM_036987498.1 | mRNA | upstream | 516028 | 18130207 ~ 18136898 (-) | False | si:dkey-111f13.5 |
| XM_036987497.1 | mRNA | upstream | 516029 | 18130208 ~ 18138722 (-) | True | si:dkey-111f13.5 |
| XR_002474734.2 | mRNA | upstream | 534126 | 18148305 ~ 18154722 (-) | False | LOC110531652 |
| TU885078 | other | downstream | 56121 | 17458677 ~ 17463822 (-) | True | G776714 |
| TU885036 | other | downstream | 88589 | 17417647 ~ 17431354 (-) | True | LOC110532943 |
| TU885001 | other | downstream | 165596 | 17345478 ~ 17354347 (-) | False | G776642 |
| TU885002 | other | downstream | 165596 | 17345478 ~ 17354347 (-) | True | G776642 |
| TU885013 | other | downstream | 199570 | 17319615 ~ 17320373 (-) | True | G776652 |
| TU885184 | other | upstream | 41415 | 17655594 ~ 17655980 (-) | True | G776812 |
| TU885186 | other | upstream | 41809 | 17655988 ~ 17656325 (-) | True | G776814 |
| TU885192 | other | upstream | 44837 | 17659016 ~ 17659403 (-) | True | G776820 |
| TU885195 | other | upstream | 45511 | 17659690 ~ 17660078 (-) | False | G776822 |
| TU885197 | other | upstream | 45511 | 17659690 ~ 17660483 (-) | False | G776822 |
