Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU896250 |
| length | 276 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 1 |
| gene id | G786952 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 27245570 ~ 27245845 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU896170 | lncRNA | upstream | 174626 | 27070729 ~ 27070944 (+) | True | G786877 |
| TU896092 | lncRNA | upstream | 294580 | 26950789 ~ 26950990 (+) | True | G786799 |
| TU896091 | lncRNA | upstream | 295092 | 26950265 ~ 26950478 (+) | True | G786798 |
| TU896090 | lncRNA | upstream | 311361 | 26933967 ~ 26934209 (+) | True | G786797 |
| TU896076 | lncRNA | upstream | 338929 | 26906228 ~ 26906641 (+) | True | G786783 |
| TU896263 | lncRNA | downstream | 31933 | 27277778 ~ 27277986 (+) | True | G786965 |
| TU896264 | lncRNA | downstream | 32842 | 27278687 ~ 27280021 (+) | False | G786966 |
| TU896265 | lncRNA | downstream | 32842 | 27278687 ~ 27283799 (+) | True | G786966 |
| TU896267 | lncRNA | downstream | 46045 | 27291890 ~ 27292246 (+) | True | G786968 |
| TU896282 | lncRNA | downstream | 60052 | 27305897 ~ 27306937 (+) | True | G786980 |
| XM_021615294.2 | mRNA | upstream | 25183 | 27214119 ~ 27220387 (+) | True | epdl1 |
| XM_036987710.1 | mRNA | upstream | 32383 | 27196521 ~ 27213187 (+) | True | alpk1 |
| XM_021615288.2 | mRNA | upstream | 1413283 | 25792766 ~ 25832287 (+) | False | LOC110531839 |
| XM_036987701.1 | mRNA | upstream | 1413283 | 25792772 ~ 25832287 (+) | False | LOC110531839 |
| XM_021615285.2 | mRNA | upstream | 1454375 | 25786100 ~ 25791195 (+) | False | LOC110531838 |
| XR_002474765.2 | mRNA | downstream | 10758 | 27256603 ~ 27267492 (+) | True | LOC110531847 |
| XM_021615311.2 | mRNA | downstream | 94853 | 27340698 ~ 27375922 (+) | False | LOC110531852 |
| XM_021615314.2 | mRNA | downstream | 94872 | 27340717 ~ 27374100 (+) | False | LOC110531852 |
| XM_021615313.2 | mRNA | downstream | 94881 | 27340726 ~ 27374100 (+) | False | LOC110531852 |
| XM_036987724.1 | mRNA | downstream | 95843 | 27341688 ~ 27374100 (+) | True | LOC110531852 |
| TU895770 | other | upstream | 832038 | 26413112 ~ 26413532 (+) | True | G786496 |
| TU895436 | other | upstream | 1286703 | 25958084 ~ 25958867 (+) | True | G786218 |
| TU895142 | other | upstream | 1502661 | 25712997 ~ 25742909 (+) | True | G785962 |
| TU895278 | other | upstream | 1698603 | 25545231 ~ 25546967 (+) | True | G786091 |
| TU895266 | other | upstream | 1713293 | 25527673 ~ 25532277 (+) | True | LOC110531825 |
| TU896328 | other | downstream | 133487 | 27379332 ~ 27379664 (+) | True | G787022 |
| TU896363 | other | downstream | 239949 | 27485794 ~ 27487523 (+) | True | taf6l |
| TU899899 | other | downstream | 2094136 | 29339981 ~ 29342203 (+) | False | rbpjb |
| TU899896 | other | downstream | 2094602 | 29340447 ~ 29342203 (+) | True | rbpjb |
| TU901372 | other | downstream | 3036830 | 30282675 ~ 30288163 (+) | False | LOC110531891 |
