Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU899279 |
| length | 688 |
| lncRNA type | read_through |
| GC content | 0.51 |
| exon number | 2 |
| gene id | G789754 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 28923955 ~ 28996300 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU899150 | lncRNA | upstream | 223058 | 28696693 ~ 28700897 (+) | True | G789629 |
| TU898997 | lncRNA | upstream | 253670 | 28667262 ~ 28670285 (+) | True | G789485 |
| TU899005 | lncRNA | upstream | 384808 | 28531813 ~ 28539147 (+) | True | G789493 |
| TU898979 | lncRNA | upstream | 476621 | 28447127 ~ 28447334 (+) | True | G789481 |
| TU898969 | lncRNA | upstream | 486405 | 28436588 ~ 28437550 (+) | False | G789472 |
| TU899723 | lncRNA | downstream | 2279 | 28998579 ~ 28998779 (+) | True | G790159 |
| TU899736 | lncRNA | downstream | 18866 | 29015166 ~ 29020160 (+) | True | G790172 |
| TU899740 | lncRNA | downstream | 29098 | 29025398 ~ 29025622 (+) | True | G790176 |
| TU899741 | lncRNA | downstream | 30411 | 29026711 ~ 29026960 (+) | True | G790177 |
| TU899745 | lncRNA | downstream | 36204 | 29032504 ~ 29032733 (+) | True | G790181 |
| XR_005053221.1 | mRNA | upstream | 29897 | 28893048 ~ 28894058 (+) | True | LOC118966022 |
| XM_036987777.1 | mRNA | upstream | 260321 | 28553769 ~ 28663634 (+) | False | LOC110531878 |
| XM_036987778.1 | mRNA | upstream | 260321 | 28553783 ~ 28663634 (+) | False | LOC110531878 |
| XM_036987776.1 | mRNA | upstream | 260321 | 28603664 ~ 28663634 (+) | False | LOC110531878 |
| XM_036987779.1 | mRNA | upstream | 260321 | 28603669 ~ 28663634 (+) | True | LOC110531878 |
| XM_021615358.2 | mRNA | downstream | 40155 | 29036455 ~ 29039588 (+) | True | LOC110531882 |
| XM_036987790.1 | mRNA | downstream | 251827 | 29248127 ~ 29340353 (+) | False | rbpjb |
| XM_036987791.1 | mRNA | downstream | 251833 | 29248133 ~ 29337758 (+) | False | rbpjb |
| XM_036987792.1 | mRNA | downstream | 303575 | 29299875 ~ 29340353 (+) | False | rbpjb |
| XM_036987793.1 | mRNA | downstream | 325304 | 29321604 ~ 29340353 (+) | False | rbpjb |
| TU896363 | other | upstream | 1436432 | 27485794 ~ 27487523 (+) | True | taf6l |
| TU896328 | other | upstream | 1544291 | 27379332 ~ 27379664 (+) | True | G787022 |
| TU895770 | other | upstream | 2510423 | 26413112 ~ 26413532 (+) | True | G786496 |
| TU895436 | other | upstream | 2965088 | 25958084 ~ 25958867 (+) | True | G786218 |
| TU895142 | other | upstream | 3181046 | 25712997 ~ 25742909 (+) | True | G785962 |
| TU899899 | other | downstream | 343681 | 29339981 ~ 29342203 (+) | False | rbpjb |
| TU899896 | other | downstream | 344147 | 29340447 ~ 29342203 (+) | True | rbpjb |
| TU901372 | other | downstream | 1286375 | 30282675 ~ 30288163 (+) | False | LOC110531891 |
| TU901374 | other | downstream | 1286375 | 30282675 ~ 30288163 (+) | True | LOC110531891 |
| TU903452 | other | downstream | 2599696 | 31595996 ~ 31596918 (+) | True | G793757 |
