Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU900086 |
| length | 220 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G790493 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 29543019 ~ 29543870 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU899897 | lncRNA | upstream | 202694 | 29338594 ~ 29340325 (+) | False | rbpjb |
| TU899900 | lncRNA | upstream | 203219 | 29338594 ~ 29339800 (+) | False | rbpjb |
| TU899901 | lncRNA | upstream | 204575 | 29337786 ~ 29338444 (+) | False | rbpjb |
| TU899778 | lncRNA | upstream | 457143 | 29085649 ~ 29085876 (+) | True | G790214 |
| TU899775 | lncRNA | upstream | 462949 | 29079844 ~ 29080070 (+) | True | G790211 |
| TU900498 | lncRNA | downstream | 25977 | 29569847 ~ 29570077 (+) | True | G790888 |
| TU900523 | lncRNA | downstream | 45374 | 29589244 ~ 29589523 (+) | True | G790913 |
| TU900528 | lncRNA | downstream | 48375 | 29592245 ~ 29592728 (+) | True | G790918 |
| TU900542 | lncRNA | downstream | 57347 | 29601217 ~ 29601417 (+) | True | G790932 |
| TU900595 | lncRNA | downstream | 97743 | 29641613 ~ 29641894 (+) | True | G790985 |
| XM_021615368.2 | mRNA | upstream | 69230 | 29383092 ~ 29473789 (+) | False | stim2b |
| XM_021615370.2 | mRNA | upstream | 69230 | 29383093 ~ 29473789 (+) | True | stim2b |
| XM_036987795.1 | mRNA | upstream | 161350 | 29354116 ~ 29381669 (+) | True | tbc1d19 |
| XM_036987790.1 | mRNA | upstream | 202666 | 29248127 ~ 29340353 (+) | False | rbpjb |
| XM_036987792.1 | mRNA | upstream | 202666 | 29299875 ~ 29340353 (+) | False | rbpjb |
| XR_002474771.2 | mRNA | downstream | 738767 | 30282637 ~ 30286239 (+) | False | LOC110531891 |
| XM_021615374.2 | mRNA | downstream | 830501 | 30374371 ~ 30594050 (+) | False | LOC110531892 |
| XM_021615372.2 | mRNA | downstream | 830501 | 30374371 ~ 30598347 (+) | False | LOC110531892 |
| XM_021615373.2 | mRNA | downstream | 830502 | 30374372 ~ 30591078 (+) | False | LOC110531892 |
| XM_021615371.2 | mRNA | downstream | 830502 | 30374372 ~ 30598347 (+) | True | LOC110531892 |
| TU899899 | other | upstream | 200816 | 29339981 ~ 29342203 (+) | False | rbpjb |
| TU899896 | other | upstream | 200816 | 29340447 ~ 29342203 (+) | True | rbpjb |
| TU896363 | other | upstream | 2055496 | 27485794 ~ 27487523 (+) | True | taf6l |
| TU896328 | other | upstream | 2163355 | 27379332 ~ 27379664 (+) | True | G787022 |
| TU895770 | other | upstream | 3129487 | 26413112 ~ 26413532 (+) | True | G786496 |
| TU901372 | other | downstream | 738805 | 30282675 ~ 30288163 (+) | False | LOC110531891 |
| TU901374 | other | downstream | 738805 | 30282675 ~ 30288163 (+) | True | LOC110531891 |
| TU903452 | other | downstream | 2052126 | 31595996 ~ 31596918 (+) | True | G793757 |
| TU903612 | other | downstream | 2209465 | 31753335 ~ 31756445 (+) | True | LOC110531915 |
| TU904135 | other | downstream | 2578812 | 32122682 ~ 32124851 (+) | False | zgc:112271 |
