Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU900498 |
| length | 231 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G790888 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 29569847 ~ 29570077 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU900086 | lncRNA | upstream | 25977 | 29543019 ~ 29543870 (+) | True | G790493 |
| TU899897 | lncRNA | upstream | 229522 | 29338594 ~ 29340325 (+) | False | rbpjb |
| TU899900 | lncRNA | upstream | 230047 | 29338594 ~ 29339800 (+) | False | rbpjb |
| TU899901 | lncRNA | upstream | 231403 | 29337786 ~ 29338444 (+) | False | rbpjb |
| TU899778 | lncRNA | upstream | 483971 | 29085649 ~ 29085876 (+) | True | G790214 |
| TU900523 | lncRNA | downstream | 19167 | 29589244 ~ 29589523 (+) | True | G790913 |
| TU900528 | lncRNA | downstream | 22168 | 29592245 ~ 29592728 (+) | True | G790918 |
| TU900542 | lncRNA | downstream | 31140 | 29601217 ~ 29601417 (+) | True | G790932 |
| TU900595 | lncRNA | downstream | 71536 | 29641613 ~ 29641894 (+) | True | G790985 |
| TU900610 | lncRNA | downstream | 82395 | 29652472 ~ 29652681 (+) | True | G790999 |
| XM_021615368.2 | mRNA | upstream | 96058 | 29383092 ~ 29473789 (+) | False | stim2b |
| XM_021615370.2 | mRNA | upstream | 96058 | 29383093 ~ 29473789 (+) | True | stim2b |
| XM_036987795.1 | mRNA | upstream | 188178 | 29354116 ~ 29381669 (+) | True | tbc1d19 |
| XM_036987792.1 | mRNA | upstream | 229494 | 29299875 ~ 29340353 (+) | False | rbpjb |
| XR_002474771.2 | mRNA | downstream | 712560 | 30282637 ~ 30286239 (+) | False | LOC110531891 |
| XM_021615374.2 | mRNA | downstream | 804294 | 30374371 ~ 30594050 (+) | False | LOC110531892 |
| XM_021615372.2 | mRNA | downstream | 804294 | 30374371 ~ 30598347 (+) | False | LOC110531892 |
| XM_021615373.2 | mRNA | downstream | 804295 | 30374372 ~ 30591078 (+) | False | LOC110531892 |
| XM_021615371.2 | mRNA | downstream | 804295 | 30374372 ~ 30598347 (+) | True | LOC110531892 |
| TU899899 | other | upstream | 227644 | 29339981 ~ 29342203 (+) | False | rbpjb |
| TU899896 | other | upstream | 227644 | 29340447 ~ 29342203 (+) | True | rbpjb |
| TU896363 | other | upstream | 2082324 | 27485794 ~ 27487523 (+) | True | taf6l |
| TU896328 | other | upstream | 2190183 | 27379332 ~ 27379664 (+) | True | G787022 |
| TU895770 | other | upstream | 3156315 | 26413112 ~ 26413532 (+) | True | G786496 |
| TU901372 | other | downstream | 712598 | 30282675 ~ 30288163 (+) | False | LOC110531891 |
| TU901374 | other | downstream | 712598 | 30282675 ~ 30288163 (+) | True | LOC110531891 |
| TU903452 | other | downstream | 2025919 | 31595996 ~ 31596918 (+) | True | G793757 |
| TU903612 | other | downstream | 2183258 | 31753335 ~ 31756445 (+) | True | LOC110531915 |
| TU904135 | other | downstream | 2552605 | 32122682 ~ 32124851 (+) | False | zgc:112271 |
