RNA id: TU903811



Basic Information


Item Value
RNA id TU903811
length 225
lncRNA type inter_gene
GC content 0.52
exon number 1
gene id G794080
representative True

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 31844089 ~ 31844313 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CGGAAATAGTGTCCGGAGATCTGTTCAGAAGGATAGAAGTACAGGGAATAGTATTTGTCTGGGATGGTGCGGACTTCGGTGAGCCTGAGCTGTGGCCGCCAGTTGTAGACTTGAACTGAGGCAGTTGGTTATTGATCTAGGAGAGGGTCTCAGCTGTTAAGACCAGGGGCCGAACTGCTGCAGGAGTGGTTGGCAAGTAACTGGCTGAGCTGGCTTGGATAAGGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU903807 lncRNA downstream 3492 31832733 ~ 31840597 (-) True G794077
TU903804 lncRNA downstream 14015 31829769 ~ 31830074 (-) True G794075
TU903802 lncRNA downstream 17199 31826389 ~ 31826890 (-) True G794073
TU903792 lncRNA downstream 28995 31814876 ~ 31815094 (-) True G794063
TU903777 lncRNA downstream 45792 31798085 ~ 31798297 (-) True G794048
TU903816 lncRNA upstream 10944 31855257 ~ 31855569 (-) True G794085
TU903820 lncRNA upstream 16926 31861239 ~ 31861438 (-) True G794089
TU903852 lncRNA upstream 27524 31871837 ~ 31890566 (-) True G794118
TU903874 lncRNA upstream 52463 31896776 ~ 31897306 (-) True G794140
TU903877 lncRNA upstream 54671 31898984 ~ 31899198 (-) True G794143
XM_021615393.2 mRNA downstream 63877 31772967 ~ 31780212 (-) True LOC110531916
LOC110531151 mRNA downstream 349595 31369483 ~ 31494494 (-) True LOC110531151
XM_036986936.1 mRNA downstream 803874 31038078 ~ 31040215 (-) True LOC118965934
LOC118965933 mRNA downstream 1009701 30832726 ~ 30834388 (-) True LOC118965933
LOC110532982 mRNA downstream 1483297 30359807 ~ 30360792 (-) True LOC110532982
XM_021615398.2 mRNA upstream 248881 32093194 ~ 32102718 (-) True LOC110531919
XM_021615406.2 mRNA upstream 269991 32114304 ~ 32121299 (-) False slx1b
XM_021615402.2 mRNA upstream 269991 32114304 ~ 32121923 (-) False slx1b
XM_021615405.2 mRNA upstream 269991 32114304 ~ 32121948 (-) False slx1b
XM_021615401.2 mRNA upstream 269991 32114304 ~ 32122092 (-) False slx1b
TU903541 other downstream 181891 31661239 ~ 31662198 (-) True G793842
TU903182 other downstream 425116 31418455 ~ 31418973 (-) True G793489
TU903165 other downstream 440220 31403482 ~ 31403869 (-) True G793472
TU901919 other downstream 1486125 30315310 ~ 30357964 (-) True G792267
TU900193 other downstream 2695072 29131374 ~ 29149017 (-) True G790598
TU904054 other upstream 181758 32026071 ~ 32028268 (-) False G794311
TU906814 other upstream 2206746 34051059 ~ 34057549 (-) True G796733
TU907768 other upstream 3025642 34869955 ~ 34875879 (-) True G797605
TU908405 other upstream 3509906 35354219 ~ 35354675 (-) True G798195
TU908411 other upstream 3541540 35385853 ~ 35387132 (-) False LOC110531966

Expression Profile