RNA id: TU904694



Basic Information


Item Value
RNA id TU904694
length 764
RNA type TUCP
GC content 0.38
exon number 2
gene id G794886
representative True

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 32583606 ~ 32587388 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TGTTACATTGTTTCAAATTCATATTGTGAATCGCCCATAAATTTGACCAAATTGTGAAATGATTTTTAGGCGACATCGCCCAGCCCTATTTGTAGGCATCAGATACTCTAGGTTAGGTAACCCAGAATATGACACCATTTTTATTTTGTACCTTGTGTCCTTTTTCATGGGCTTTCTGTATAAGATTGTTGACGTCATCGGCATATGCTGTGGCGGGGTCTGGATGGTCTTGTCTATAGTTGCCTCTGTAGAGGTCAGGGCTCAGAGCCACGTGAACAGATTTGCTCTGCTCTGCATTGGCCAACTGGTGAAATTTATAAGGGCTGATGTTAATGAGCGATGACACGTGGCCGTGATAGGCACTGCAAATAGAGGAACATGGAAACACTGATGGTGACAGATGAAATACCAGATTCTCAATGAAATCTAGAGTAAATTCGGTTAATGACGTGTTATAAGTGAACATTGATCATAGAACTCTCTAACACATATGCACATTTagggcacacaaaaaaatcacgTTAGCAGAATAATTAACATTTGGACCAGATGGCATATTGTCTAAGACAAATCTGGGTTAGTTAGTGTTTTTACTGCTCTAGAAAGAACAACTTACAAAGAATTTGCAACTGTGCAAAGTATGCAGATGTTATTACTAGAGAGACAACGTTTTAAACTCTGTATTTACACTTCTTCTTTACATTAAGATCAGATCCTGGTTTTAATTTGACCTTCTGTTCTTTTATGTTTTATTCTCCCTATAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU904692 lncRNA upstream 20863 32561517 ~ 32562743 (+) True G794884
TU904720 lncRNA upstream 41333 32541167 ~ 32542273 (+) True G794912
TU904702 lncRNA upstream 79601 32503758 ~ 32504005 (+) True G794894
TU904698 lncRNA upstream 89360 32494034 ~ 32494246 (+) True G794890
TU904657 lncRNA upstream 102705 32480669 ~ 32480901 (+) True G794871
TU904741 lncRNA downstream 40170 32627558 ~ 32651727 (+) True G794932
TU904808 lncRNA downstream 133232 32720620 ~ 32720875 (+) True G794998
TU904809 lncRNA downstream 135111 32722499 ~ 32722823 (+) True G794999
TU904810 lncRNA downstream 136027 32723415 ~ 32723665 (+) True G795000
TU904812 lncRNA downstream 138578 32725966 ~ 32726279 (+) True G795002
XM_021615424.1 mRNA upstream 43955 32520078 ~ 32539651 (+) True ostc
XM_021615423.2 mRNA upstream 85004 32494490 ~ 32498602 (+) True rpl34
NM_001160518.1 mRNA upstream 458853 32122759 ~ 32124753 (+) False zgc:112271
XM_021615407.2 mRNA upstream 469307 32111792 ~ 32114299 (+) True LOC110531922
XM_036986938.1 mRNA upstream 504883 32077618 ~ 32078723 (+) True LOC118965935
trnag-ucc-3 mRNA downstream 447557 33034945 ~ 33035016 (+) False trnag-ucc-3
trnag-ucc-4 mRNA downstream 448063 33035451 ~ 33035522 (+) True trnag-ucc-4
trnag-ucc-6 mRNA downstream 455204 33042592 ~ 33042663 (+) True trnag-ucc-6
trnag-ucc-7 mRNA downstream 456615 33044003 ~ 33044074 (+) True trnag-ucc-7
trnag-ucc-8 mRNA downstream 459423 33046811 ~ 33046882 (+) True trnag-ucc-8
TU904701 other upstream 80857 32502396 ~ 32502749 (+) True G794893
TU904700 other upstream 81251 32501847 ~ 32502355 (+) True G794892
TU904135 other upstream 458755 32122682 ~ 32124851 (+) False zgc:112271
TU904136 other upstream 458870 32122682 ~ 32124736 (+) False zgc:112271
TU904137 other upstream 459168 32122682 ~ 32124438 (+) True zgc:112271
TU906563 other downstream 1534034 34121422 ~ 34121740 (+) True G796495
TU907166 other downstream 1968543 34555931 ~ 34556622 (+) True G797056
TU908119 other downstream 2777600 35364988 ~ 35372148 (+) True G797932
TU909468 other downstream 3725741 36313129 ~ 36316805 (+) True G799053
TU910049 other downstream 4447030 37034418 ~ 37035918 (+) True G799578

Expression Profile