RNA id: TU906687



Basic Information


Item Value
RNA id TU906687
length 227
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G796617
representative True

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 34342706 ~ 34342932 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ctgtactcactgagtctgtacctagtcaatgttttcctcagttttctatcagtcacagtggtcagatagtctgccattATCTCACATAAACATTCTGTAGAACTGTTGTGTGTAAATACTGGAGTCGTTCCACCAATTCGATGCCTTTTGAGAAGTATAAGttggcaaaaaacaacaacattgaattCACCTAATTATAACATTGTCATACAGagcacatgtaaaaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU906674 lncRNA upstream 16299 34326104 ~ 34326407 (+) True G796604
TU906671 lncRNA upstream 19655 34322588 ~ 34323051 (+) True G796601
TU906627 lncRNA upstream 40821 34301488 ~ 34301885 (+) True G796558
TU906585 lncRNA upstream 162245 34180169 ~ 34180461 (+) True G796517
TU906557 lncRNA upstream 232347 34110136 ~ 34110359 (+) True G796489
TU906693 lncRNA downstream 16967 34359899 ~ 34360091 (+) True G796623
TU906699 lncRNA downstream 23075 34366007 ~ 34367054 (+) True G796629
TU906708 lncRNA downstream 52568 34395500 ~ 34395818 (+) True G796636
TU906710 lncRNA downstream 55063 34397995 ~ 34398216 (+) True G796638
TU906692 lncRNA downstream 81044 34423976 ~ 34426889 (+) True G796622
XR_002474782.2 mRNA upstream 44441 34281341 ~ 34298265 (+) True LOC110531954
XM_021615495.2 mRNA upstream 213835 34058069 ~ 34128871 (+) False LOC110531951
XM_021615497.2 mRNA upstream 213835 34064382 ~ 34128871 (+) True LOC110531951
XM_021614371.2 mRNA upstream 285136 34052296 ~ 34057570 (+) False rl32
XM_021615501.1 mRNA downstream 1423 34344355 ~ 34349297 (+) True LOC110531955
XR_005053228.1 mRNA downstream 42952 34385884 ~ 34392962 (+) True LOC118966029
XM_036989281.1 mRNA downstream 267358 34610290 ~ 34612491 (+) True LOC110531960
XM_021615507.2 mRNA downstream 299987 34642919 ~ 34682784 (+) True LOC110531961
XM_036986939.1 mRNA downstream 603208 34946140 ~ 35104382 (+) True LOC110531155
TU906563 other upstream 220966 34121422 ~ 34121740 (+) True G796495
TU904694 other upstream 1755318 32583606 ~ 32587388 (+) True G794886
TU904701 other upstream 1839957 32502396 ~ 32502749 (+) True G794893
TU904700 other upstream 1840351 32501847 ~ 32502355 (+) True G794892
TU904137 other upstream 2218268 32122682 ~ 32124438 (+) True zgc:112271
TU907166 other downstream 212999 34555931 ~ 34556622 (+) True G797056
TU908119 other downstream 1022056 35364988 ~ 35372148 (+) True G797932
TU909468 other downstream 1970197 36313129 ~ 36316805 (+) True G799053
TU910049 other downstream 2691486 37034418 ~ 37035918 (+) True G799578
TU910348 other downstream 3224313 37567245 ~ 37570411 (+) True G799858

Expression Profile