RNA id: TU907046



Basic Information


Item Value
RNA id TU907046
length 201
lncRNA type inter_gene
GC content 0.33
exon number 1
gene id G796939
representative True

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 34394976 ~ 34395176 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


tttgaTACCTGGGCTTTTTAGGTTTGTACAGTATGTATTTTTTTGCTTGCTTATTACCTAGCTATATCTGTTTGGATCATTGAGTTTCGAATAATAGCCCAAAATCTTTTTTGGTAAAACTATAGTTCTTCTAACTGGGGAAAAGAAAGAACAATATTCCCCAATACCcgtatgtatttggacagtgacaaTATTCAAAAc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU907045 lncRNA downstream 1863 34392881 ~ 34393113 (-) True G796938
TU907044 lncRNA downstream 3830 34390846 ~ 34391146 (-) True G796937
TU906959 lncRNA downstream 34874 34359904 ~ 34360102 (-) True LOC110531153
TU906966 lncRNA downstream 38185 34356153 ~ 34356791 (-) True G796866
TU906964 lncRNA downstream 40804 34353371 ~ 34354172 (-) True G796864
TU907047 lncRNA upstream 491 34395667 ~ 34396123 (-) True G796940
TU907055 lncRNA upstream 11864 34407040 ~ 34407381 (-) True G796948
TU907057 lncRNA upstream 13606 34408782 ~ 34408983 (-) True G796950
TU907058 lncRNA upstream 14060 34409236 ~ 34409580 (-) True G796951
TU906945 lncRNA upstream 28786 34423962 ~ 34426885 (-) False G796855
XM_036987850.1 mRNA downstream 9103 34365385 ~ 34385873 (-) True LOC110531957
XM_036987845.1 mRNA downstream 9104 34362170 ~ 34385872 (-) False LOC110531957
XM_036987848.1 mRNA downstream 9104 34362170 ~ 34385872 (-) False LOC110531957
XM_036987847.1 mRNA downstream 9105 34362170 ~ 34385871 (-) False LOC110531957
XM_036987843.1 mRNA upstream 33892 34429068 ~ 34531428 (-) True LOC110531958
XR_005053229.1 mRNA upstream 201364 34596540 ~ 34607133 (-) True LOC118966030
XM_021615504.2 mRNA upstream 222324 34617500 ~ 34636294 (-) True eif2d
XM_021617143.2 mRNA upstream 320564 34715740 ~ 34721316 (-) True LOC110533011
XM_021615508.2 mRNA upstream 334158 34729334 ~ 34737284 (-) False LOC110531962
TU906814 other downstream 337427 34051059 ~ 34057549 (-) True G796733
TU904054 other downstream 2366708 32026071 ~ 32028268 (-) False G794311
TU903541 other downstream 2732778 31661239 ~ 31662198 (-) True G793842
TU903182 other downstream 2976003 31418455 ~ 31418973 (-) True G793489
TU903165 other downstream 2991107 31403482 ~ 31403869 (-) True G793472
TU907768 other upstream 474779 34869955 ~ 34875879 (-) True G797605
TU908405 other upstream 959043 35354219 ~ 35354675 (-) True G798195
TU908411 other upstream 990677 35385853 ~ 35387132 (-) False LOC110531966
TU908458 other upstream 1096850 35492026 ~ 35521332 (-) True LOC118966032
TU909208 other upstream 1582246 35977422 ~ 35979115 (-) True LOC110531979

Expression Profile