RNA id: TU907910



Basic Information


Item Value
RNA id TU907910
length 304
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G797730
representative True

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 35128319 ~ 35128622 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


taatagaaaggttcagtacttttgtgaatcatcacagtacagttgaaaaatatatggcaaataggaatccaatatggatgggatttagagatagatgggaggggttgaatggagctgaagggtgggactaataacaacaagataacaaatgtaaaacatacgtggtctgtaaaatgtatacagGCTCAGAAGTTTTATGAAGTAGCAAAGTTccaaatatatggcaaatagaaatcaaactggatggacataaGAAACAGAGGTAGGCCaggacaaaaaacaaacaaattataACTATTGTAac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU907888 lncRNA upstream 13029 35114954 ~ 35115290 (+) True G797708
TU907348 lncRNA upstream 19586 35104536 ~ 35108733 (+) False G797224
TU907346 lncRNA upstream 19586 35104853 ~ 35108733 (+) False G797224
TU907341 lncRNA upstream 19586 35105822 ~ 35108733 (+) False G797224
TU907344 lncRNA upstream 19656 35104536 ~ 35108663 (+) False G797224
TU907920 lncRNA downstream 4340 35132962 ~ 35133250 (+) True G797739
TU907956 lncRNA downstream 32971 35161593 ~ 35161831 (+) True G797775
TU907966 lncRNA downstream 39287 35167909 ~ 35168199 (+) True G797785
TU907970 lncRNA downstream 40242 35168864 ~ 35169071 (+) True G797789
TU907976 lncRNA downstream 43698 35172320 ~ 35172539 (+) True G797795
XM_036986939.1 mRNA upstream 23937 34946140 ~ 35104382 (+) True LOC110531155
XM_021615507.2 mRNA upstream 445535 34642919 ~ 34682784 (+) True LOC110531961
XM_036989281.1 mRNA upstream 515828 34610290 ~ 34612491 (+) True LOC110531960
XR_005053228.1 mRNA upstream 735357 34385884 ~ 34392962 (+) True LOC118966029
XM_021615501.1 mRNA upstream 779022 34344355 ~ 34349297 (+) True LOC110531955
XM_036987863.1 mRNA downstream 87249 35215871 ~ 35360678 (+) True LOC110531964
XR_002474784.2 mRNA downstream 271057 35399679 ~ 35403549 (+) False LOC110531967
XR_002474785.2 mRNA downstream 271057 35399679 ~ 35403549 (+) False LOC110531967
XR_002474786.2 mRNA downstream 271057 35399679 ~ 35403549 (+) False LOC110531967
XR_002474787.2 mRNA downstream 271057 35399679 ~ 35403549 (+) False LOC110531967
TU907166 other upstream 571697 34555931 ~ 34556622 (+) True G797056
TU906563 other upstream 1006579 34121422 ~ 34121740 (+) True G796495
TU904694 other upstream 2540931 32583606 ~ 32587388 (+) True G794886
TU904701 other upstream 2625570 32502396 ~ 32502749 (+) True G794893
TU904700 other upstream 2625964 32501847 ~ 32502355 (+) True G794892
TU908119 other downstream 236366 35364988 ~ 35372148 (+) True G797932
TU909468 other downstream 1184507 36313129 ~ 36316805 (+) True G799053
TU910049 other downstream 1905796 37034418 ~ 37035918 (+) True G799578
TU910348 other downstream 2438623 37567245 ~ 37570411 (+) True G799858
TU911427 other downstream 2941594 38070216 ~ 38071433 (+) False G800834

Expression Profile