RNA id: TU909032



Basic Information


Item Value
RNA id TU909032
length 415
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G798718
representative True

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 36149336 ~ 36149750 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ACATTTAAGAGGAACGAAGAAAACAAGACCAGGagggagcagacaggacagagagaacatgacaATAGGAAGCAATGGTCAGTCCCGTAAACATTTAGGAGCAGGGTGCACGAGAGAGCGCATCAGCAATCACGTTTTCAGATCCCCTGATGTGCCGCACATCGAGATGGAATGATTGTAAAAATAAACACCATCGCATTATCCTCTGGTTTGGACACATCATGGACCTCAAAAAAGTGAGGGGGTTATGGTCGGTGTAGACCACAATAGGTACTACCCCCGACCCGACATACACTTCGAAGTGTTGTAGCGCCCAAATGAGTGCTAGTGCTTCCTTTTCAATAACCGAATAGTTCAACTGATAATCGTTAAACTTTTTGGAAAAGAAACTAACAGGCCTCTCAACCCCAGACAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU909031 lncRNA upstream 119 36148960 ~ 36149217 (+) True G798717
TU909015 lncRNA upstream 30517 36118168 ~ 36118819 (+) True G798701
TU908826 lncRNA upstream 212325 35936669 ~ 35937011 (+) True G798584
TU908825 lncRNA upstream 213119 35935674 ~ 35936217 (+) True G798583
TU908811 lncRNA upstream 229583 35915737 ~ 35919753 (+) False G798569
TU909033 lncRNA downstream 212 36149962 ~ 36150371 (+) True G798719
TU908950 lncRNA downstream 2776 36152526 ~ 36189791 (+) False G798672
TU908957 lncRNA downstream 2776 36152526 ~ 36235544 (+) False G798672
TU908986 lncRNA downstream 19020 36168770 ~ 36173855 (+) False G798675
TU908967 lncRNA downstream 22691 36172441 ~ 36173198 (+) False G798673
XM_021615528.2 mRNA upstream 255926 35885933 ~ 35893410 (+) False LOC110531975
XM_021615464.2 mRNA downstream 99594 36249344 ~ 36262924 (+) False LOC110531941
XM_021615463.2 mRNA downstream 99597 36249347 ~ 36262924 (+) False LOC110531941
XM_021615465.2 mRNA downstream 99601 36249351 ~ 36262924 (+) False LOC110531941
XM_021615466.2 mRNA downstream 99605 36249355 ~ 36262924 (+) True LOC110531941
XM_021615449.2 mRNA downstream 237168 36386918 ~ 36396094 (+) True si:dkey-7l6.3
TU908119 other upstream 777188 35364988 ~ 35372148 (+) True G797932
TU907166 other upstream 1592714 34555931 ~ 34556622 (+) True G797056
TU906563 other upstream 2027596 34121422 ~ 34121740 (+) True G796495
TU904694 other upstream 3561948 32583606 ~ 32587388 (+) True G794886
TU904701 other upstream 3646587 32502396 ~ 32502749 (+) True G794893
TU909468 other downstream 163379 36313129 ~ 36316805 (+) True G799053
TU910049 other downstream 884668 37034418 ~ 37035918 (+) True G799578
TU910348 other downstream 1417495 37567245 ~ 37570411 (+) True G799858
TU911427 other downstream 1920466 38070216 ~ 38071433 (+) False G800834
TU912414 other downstream 2638311 38788061 ~ 38788354 (+) True G801778

Expression Profile