RNA id: TU908986



Basic Information


Item Value
RNA id TU908986
length 342
lncRNA type inter_gene
GC content 0.34
exon number 2
gene id G798675
representative False

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 36168770 ~ 36195022 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ccataaacaaggtctaaatcatgtttggttgcactttggaagtacattttttacagaactgttcaaactagatgatagggacactgtggacaattttcagcaagttgcagcaattgaactacagaaataaccacttttccataaacaagctctaaaatcatgtttgatgcaactctggatacaatgtttaaaacataactgttcaaactagatgatagggacactgtggacaattttcagcaatttgcagcaattgaactacagaaataaccacttttccataaacaaggtctaaaatcatgtttgatgcactctggatacaatgttttaaacataactgtt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU909033 lncRNA upstream 18399 36149962 ~ 36150371 (+) True G798719
TU909032 lncRNA upstream 19020 36149336 ~ 36149750 (+) True G798718
TU909031 lncRNA upstream 19553 36148960 ~ 36149217 (+) True G798717
TU909015 lncRNA upstream 49951 36118168 ~ 36118819 (+) True G798701
TU908826 lncRNA upstream 231759 35936669 ~ 35937011 (+) True G798584
TU908983 lncRNA downstream 2852 36176707 ~ 36178755 (+) False G798675
TU908985 lncRNA downstream 3812 36177667 ~ 36195022 (+) True G798675
TU908990 lncRNA downstream 7732 36181587 ~ 36182854 (+) True G798677
TU908989 lncRNA downstream 13353 36187208 ~ 36211725 (+) True G798676
TU908952 lncRNA downstream 14891 36188746 ~ 36201714 (+) False G798672
XM_021615528.2 mRNA upstream 275360 35885933 ~ 35893410 (+) False LOC110531975
XM_021615464.2 mRNA downstream 75489 36249344 ~ 36262924 (+) False LOC110531941
XM_021615463.2 mRNA downstream 75492 36249347 ~ 36262924 (+) False LOC110531941
XM_021615465.2 mRNA downstream 75496 36249351 ~ 36262924 (+) False LOC110531941
XM_021615466.2 mRNA downstream 75500 36249355 ~ 36262924 (+) True LOC110531941
XM_021615449.2 mRNA downstream 213063 36386918 ~ 36396094 (+) True si:dkey-7l6.3
TU908119 other upstream 796622 35364988 ~ 35372148 (+) True G797932
TU907166 other upstream 1612148 34555931 ~ 34556622 (+) True G797056
TU906563 other upstream 2047030 34121422 ~ 34121740 (+) True G796495
TU904694 other upstream 3581382 32583606 ~ 32587388 (+) True G794886
TU904701 other upstream 3666021 32502396 ~ 32502749 (+) True G794893
TU909468 other downstream 139274 36313129 ~ 36316805 (+) True G799053
TU910049 other downstream 860563 37034418 ~ 37035918 (+) True G799578
TU910348 other downstream 1393390 37567245 ~ 37570411 (+) True G799858
TU911427 other downstream 1896361 38070216 ~ 38071433 (+) False G800834
TU912414 other downstream 2614206 38788061 ~ 38788354 (+) True G801778

Expression Profile