RNA id: TU909508



Basic Information


Item Value
RNA id TU909508
length 218
lncRNA type inter_gene
GC content 0.34
exon number 1
gene id G799091
representative True

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 36383136 ~ 36383353 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TATTTGATTACTATGTCACTTTTGTCACACTGTGTGAGAAGCCTGCAAgtatatgataataacatttgatttgactggatttggatttgatttgtcgTTACCAGTGGATCCAGGTGACCAGGACTGGCCCTTGATATCTGATATATTTAGCACACACATAATCATTTACAGTACTATTCCACATATGTTTTTCAAATAGCTTCCAATGTATCTTAAAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU909506 lncRNA upstream 901 36382036 ~ 36382235 (+) True G799089
TU909436 lncRNA upstream 79235 36303072 ~ 36303901 (+) True G799026
TU909420 lncRNA upstream 145987 36236949 ~ 36237149 (+) True G799011
TU908959 lncRNA upstream 147592 36234102 ~ 36235544 (+) False G798672
TU909519 lncRNA downstream 14848 36398201 ~ 36399373 (+) True G799096
TU909511 lncRNA downstream 16471 36399824 ~ 36402989 (+) False G799094
TU909512 lncRNA downstream 18691 36402044 ~ 36402739 (+) False G799094
TU909515 lncRNA downstream 18691 36402044 ~ 36402989 (+) True G799094
TU909524 lncRNA downstream 27260 36410613 ~ 36410817 (+) True G799101
XM_021615464.2 mRNA upstream 120212 36249344 ~ 36262924 (+) False LOC110531941
XM_021615463.2 mRNA upstream 120212 36249347 ~ 36262924 (+) False LOC110531941
XM_021615465.2 mRNA upstream 120212 36249351 ~ 36262924 (+) False LOC110531941
XM_021615466.2 mRNA upstream 120212 36249355 ~ 36262924 (+) True LOC110531941
XM_021615525.2 mRNA upstream 489726 35886253 ~ 35893410 (+) True LOC110531975
XM_021615449.2 mRNA downstream 3565 36386918 ~ 36396094 (+) True si:dkey-7l6.3
trnap-agg-57 mRNA downstream 89554 36472907 ~ 36472978 (+) True trnap-agg-57
trnap-agg-58 mRNA downstream 90783 36474136 ~ 36474207 (+) True trnap-agg-58
trnap-agg-59 mRNA downstream 93417 36476770 ~ 36476841 (+) True trnap-agg-59
trnap-agg-60 mRNA downstream 94648 36478001 ~ 36478072 (+) True trnap-agg-60
TU909468 other upstream 66331 36313129 ~ 36316805 (+) True G799053
TU908119 other upstream 1010988 35364988 ~ 35372148 (+) True G797932
TU907166 other upstream 1826514 34555931 ~ 34556622 (+) True G797056
TU906563 other upstream 2261396 34121422 ~ 34121740 (+) True G796495
TU904694 other upstream 3795748 32583606 ~ 32587388 (+) True G794886
TU910049 other downstream 651065 37034418 ~ 37035918 (+) True G799578
TU910348 other downstream 1183892 37567245 ~ 37570411 (+) True G799858
TU911427 other downstream 1686863 38070216 ~ 38071433 (+) False G800834
TU912414 other downstream 2404708 38788061 ~ 38788354 (+) True G801778
TU912489 other downstream 2549599 38932952 ~ 38933868 (+) True G801851

Expression Profile