RNA id: TU910862



Basic Information


Item Value
RNA id TU910862
length 606
RNA type TUCP
GC content 0.46
exon number 2
gene id G800318
representative True

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 37344395 ~ 37345147 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gtggaattgttagattacttgttagatattgctgtactgtcagaactagaagcacaagcatttcgctacactcgcaataacatctgctaaccatgtgtatgtgaccaatataaaaGGCCCAACACTCTCTCTCCATGGATAAATGTGTGTCTTTGGGCTGTATTTGACAAACCGAACGCCATAGTTAATCAAGGGGCTATGGAGTGACACATTTAATTAAGATGAGTCATGCCAGAGTAAACCCAGGGGAGTTTCAGGCCTTGTATCAAGCACTATGCAAAAAGTGCTGCAGCAGAGTTCTAGGTAAGTTGTGTGTTCCTCACCGGTTTCTTCCCCACTATGAGTTTCTCCACCTTCTGAACCTGAGACACGTGGTCCTCGTTTGTCTTCAGCTCCCTCTTCCTGATCCTTTCATAAATTCCTACCAGAGTCTCCCTGGGGATGTCCTCCCCATCATCCACCCCTGTGGAGGAGGAGACAAtggttacacacaaacacacacacacacacacacacacacccacagacagagGCGCACGGACGCAGCATGCAAATCTCAAATGCCAAGCAAAAAACGACAAGTAGTCGACTGTGCTTCTATCACGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU910682 lncRNA downstream 123400 37135664 ~ 37220995 (-) True G800155
TU910607 lncRNA downstream 319624 37024007 ~ 37024771 (-) True G800088
TU910538 lncRNA downstream 452846 36891045 ~ 36891549 (-) True G800024
TU910501 lncRNA downstream 512816 36827896 ~ 36831579 (-) True LOC110531982
TU909908 lncRNA downstream 518126 36826050 ~ 36826269 (-) True G799453
TU910817 lncRNA upstream 11786 37356933 ~ 37360724 (-) True G800276
TU910816 lncRNA upstream 15710 37360857 ~ 37361967 (-) True G800275
TU910879 lncRNA upstream 40243 37385390 ~ 37386330 (-) True G800334
TU910911 lncRNA upstream 69788 37414935 ~ 37417799 (-) True G800358
TU910942 lncRNA upstream 132580 37477727 ~ 37526430 (-) True G800389
XM_021615543.2 mRNA downstream 262626 37034299 ~ 37081769 (-) False LOC110531988
XM_036987913.1 mRNA downstream 262626 37034299 ~ 37081769 (-) True LOC110531988
XM_021615544.2 mRNA downstream 262696 37034299 ~ 37081699 (-) False LOC110531988
XM_036987909.1 mRNA downstream 380475 36953521 ~ 36963920 (-) True fbxw12
XM_036987910.1 mRNA downstream 380481 36953521 ~ 36963914 (-) False fbxw12
XM_021615554.2 mRNA upstream 20530 37365677 ~ 37372883 (-) True LOC110531992
XM_021615556.2 mRNA upstream 28073 37373220 ~ 37377287 (-) False cnbpa
XM_036987917.1 mRNA upstream 28073 37373220 ~ 37377288 (-) True cnbpa
XM_036986927.1 mRNA upstream 84746 37429893 ~ 37436192 (-) False LOC100505416
XM_036986928.1 mRNA upstream 84746 37429893 ~ 37436192 (-) False LOC100505416
TU910500 other downstream 436747 36827896 ~ 36907648 (-) False LOC110531982
TU909355 other downstream 1193758 36150338 ~ 36150637 (-) True G798993
TU909208 other downstream 1365280 35977422 ~ 35979115 (-) True LOC110531979
TU908458 other downstream 1823063 35492026 ~ 35521332 (-) True LOC118966032
TU908411 other downstream 1957263 35385853 ~ 35387132 (-) False LOC110531966
TU912701 other upstream 1496062 38841209 ~ 38841512 (-) True LOC110532015
TU912768 other upstream 1621309 38966456 ~ 38996032 (-) True G802100
TU912807 other upstream 1705383 39050530 ~ 39061381 (-) True G802138
TU912821 other upstream 1729334 39074481 ~ 39074720 (-) True G802149
TU913322 other upstream 2035603 39380750 ~ 39383210 (-) True G802602

Expression Profile