RNA id: TU910265



Basic Information


Item Value
RNA id TU910265
length 312
lncRNA type intronic
GC content 0.51
exon number 2
gene id G799779
representative True

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 37415707 ~ 37417325 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ctatcgctctctcttgcactctctctcttgcacgcgctctctcgctctctcgcgctctttcTTTCGCATTCTCTTtctcttgtgctctctctctcttgctctctctctcgcactctctcttgctgtctctcttgcgctctctcttgctctcgcTCTATCTTGCGCTCTATCtatatcttgctctctctctctctctcgctctctctctagctctatcgctctctctctagctctatcgctctctctctagctctatcgctctctctctagctctatcgctctctctctagctctatcgctctctctctagct

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU910245 lncRNA upstream 38498 37373159 ~ 37377209 (+) True G799762
TU910101 lncRNA upstream 315178 37100297 ~ 37100529 (+) True G799630
TU910097 lncRNA upstream 320746 37094756 ~ 37094961 (+) True G799626
TU910053 lncRNA upstream 367404 37046718 ~ 37048303 (+) True G799582
TU910061 lncRNA upstream 389823 37025627 ~ 37025884 (+) True G799590
TU910271 lncRNA downstream 21366 37438691 ~ 37438943 (+) True G799785
TU910275 lncRNA downstream 27819 37445144 ~ 37446422 (+) True G799789
TU910326 lncRNA downstream 112692 37530017 ~ 37530463 (+) True G799837
TU910353 lncRNA downstream 164852 37582177 ~ 37582635 (+) True G799863
TU910386 lncRNA downstream 211529 37628854 ~ 37630852 (+) True G799895
XM_021615555.2 mRNA upstream 50859 37362028 ~ 37364848 (+) True gp9
XM_021615552.2 mRNA upstream 55691 37316974 ~ 37360016 (+) False iqsec1a
XM_021615561.2 mRNA downstream 93218 37510543 ~ 37516918 (+) False LOC110531997
XM_021615560.2 mRNA downstream 93223 37510548 ~ 37516918 (+) False LOC110531997
XM_021615562.2 mRNA downstream 93229 37510554 ~ 37516918 (+) True LOC110531997
XM_021615570.2 mRNA downstream 187876 37605201 ~ 37610174 (+) False tnnc1a
XM_021615571.2 mRNA downstream 187876 37605201 ~ 37610174 (+) True tnnc1a
TU910049 other upstream 379789 37034418 ~ 37035918 (+) True G799578
TU909468 other upstream 1098902 36313129 ~ 36316805 (+) True G799053
TU908119 other upstream 2043559 35364988 ~ 35372148 (+) True G797932
TU907166 other upstream 2859085 34555931 ~ 34556622 (+) True G797056
TU906563 other upstream 3293967 34121422 ~ 34121740 (+) True G796495
TU910348 other downstream 149920 37567245 ~ 37570411 (+) True G799858
TU911427 other downstream 652891 38070216 ~ 38071433 (+) False G800834
TU912414 other downstream 1370736 38788061 ~ 38788354 (+) True G801778
TU912489 other downstream 1515627 38932952 ~ 38933868 (+) True G801851
TU912578 other downstream 1651047 39068372 ~ 39072225 (+) True LOC110532019

Expression Profile