RNA id: TU911427



Basic Information


Item Value
RNA id TU911427
length 434
RNA type TUCP
GC content 0.50
exon number 3
gene id G800834
representative False

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 38070216 ~ 38071433 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


agacagacagacagacagacagacagacagacagacagacagacacacacacacacacacactacatagcctaagcacacgcatgcacacacacacacatgtacgcgcacagacacacacacacagacagacacacagacagacagacagacagacagacagacagacagacagacagacagacacacagacagacacacacacagacagacacacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacacacagacagacagacacacagacacacagacagacacacagacacacacacagacagacacacagacagacagacagacagacagacacacagacagacagacacacagacacacagacagacacacagacacacacagac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU911417 lncRNA upstream 14944 38050333 ~ 38055272 (+) True G800826
TU911416 lncRNA upstream 17565 38050333 ~ 38052651 (+) False G800826
TU911371 lncRNA upstream 80567 37989364 ~ 37989649 (+) True G800789
TU911357 lncRNA upstream 97201 37970458 ~ 37973015 (+) True G800776
TU911303 lncRNA upstream 149849 37920109 ~ 37920367 (+) True G800727
TU911594 lncRNA downstream 263178 38334611 ~ 38337642 (+) True G800996
TU912122 lncRNA downstream 458738 38530171 ~ 38530414 (+) True G801490
TU912128 lncRNA downstream 463621 38535054 ~ 38535295 (+) True G801496
TU912143 lncRNA downstream 472943 38544376 ~ 38545690 (+) True G801511
TU912145 lncRNA downstream 475490 38546923 ~ 38547249 (+) True G801513
XM_036987920.1 mRNA upstream 36993 38021682 ~ 38033223 (+) False LOC110532011
XM_036987923.1 mRNA upstream 36993 38022305 ~ 38033223 (+) True LOC110532011
XM_036987921.1 mRNA upstream 39795 38021681 ~ 38030421 (+) False LOC110532011
XM_021615591.2 mRNA upstream 90387 37977424 ~ 37979829 (+) True LOC110532009
XM_021615579.2 mRNA upstream 121254 37923872 ~ 37948962 (+) True LOC110532007
XM_021615595.2 mRNA downstream 796836 38868269 ~ 38884647 (+) False LOC110532014
XM_036987925.1 mRNA downstream 796844 38868277 ~ 38884647 (+) True LOC110532014
XM_021615594.2 mRNA downstream 815191 38886624 ~ 38909718 (+) True LOC110532013
XM_021615603.2 mRNA downstream 992717 39064150 ~ 39072385 (+) False LOC110532019
XM_036987940.1 mRNA downstream 1039922 39111355 ~ 39237408 (+) False LOC110531165
TU910348 other upstream 499805 37567245 ~ 37570411 (+) True G799858
TU910049 other upstream 1034298 37034418 ~ 37035918 (+) True G799578
TU909468 other upstream 1753411 36313129 ~ 36316805 (+) True G799053
TU908119 other upstream 2698068 35364988 ~ 35372148 (+) True G797932
TU907166 other upstream 3513594 34555931 ~ 34556622 (+) True G797056
TU912414 other downstream 716628 38788061 ~ 38788354 (+) True G801778
TU912489 other downstream 861519 38932952 ~ 38933868 (+) True G801851
TU912578 other downstream 996939 39068372 ~ 39072225 (+) True LOC110532019
TU912870 other downstream 1161632 39233065 ~ 39237261 (+) True LOC110531165
TU913019 other downstream 1344442 39415875 ~ 39417460 (+) False G802324

Expression Profile