Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU913625 |
| length | 616 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G802875 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 39881194 ~ 39894131 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU913580 | lncRNA | upstream | 64079 | 39814175 ~ 39817115 (+) | True | G802831 |
| TU913561 | lncRNA | upstream | 92956 | 39787896 ~ 39788238 (+) | True | G802820 |
| TU913552 | lncRNA | upstream | 105495 | 39775467 ~ 39775699 (+) | True | G802811 |
| TU913519 | lncRNA | upstream | 164524 | 39716433 ~ 39716670 (+) | True | G802778 |
| TU913503 | lncRNA | upstream | 205845 | 39675013 ~ 39675349 (+) | True | G802764 |
| TU913652 | lncRNA | downstream | 23008 | 39917139 ~ 39949106 (+) | True | G802900 |
| TU913674 | lncRNA | downstream | 56670 | 39950801 ~ 39951044 (+) | True | G802919 |
| TU913675 | lncRNA | downstream | 57000 | 39951131 ~ 39951528 (+) | True | G802920 |
| TU913677 | lncRNA | downstream | 58291 | 39952422 ~ 39954470 (+) | True | G802922 |
| TU913680 | lncRNA | downstream | 66424 | 39960555 ~ 39960856 (+) | True | G802925 |
| XM_036987963.1 | mRNA | upstream | 7528 | 39865883 ~ 39873666 (+) | True | LOC110531167 |
| XM_021615647.2 | mRNA | upstream | 25255 | 39849751 ~ 39855939 (+) | False | stac3 |
| XR_005053243.1 | mRNA | upstream | 25255 | 39849751 ~ 39855939 (+) | False | stac3 |
| XM_036987962.1 | mRNA | upstream | 25255 | 39849773 ~ 39855939 (+) | True | stac3 |
| XM_021615635.2 | mRNA | upstream | 134115 | 39730948 ~ 39747079 (+) | True | map3k12 |
| XM_021615650.2 | mRNA | downstream | 45634 | 39939765 ~ 39946085 (+) | True | LOC110532052 |
| XM_021615653.2 | mRNA | downstream | 67340 | 39961471 ~ 39962986 (+) | False | LOC110532054 |
| XM_021615654.2 | mRNA | downstream | 118965 | 40013096 ~ 40046553 (+) | False | LOC110532055 |
| XM_021615655.2 | mRNA | downstream | 118970 | 40013101 ~ 40046553 (+) | True | LOC110532055 |
| XM_021615658.2 | mRNA | downstream | 162677 | 40056808 ~ 40063855 (+) | True | LOC110532057 |
| TU913576 | other | upstream | 69169 | 39810327 ~ 39812025 (+) | False | G802830 |
| TU913578 | other | upstream | 69169 | 39810327 ~ 39812025 (+) | True | G802830 |
| TU913563 | other | upstream | 88861 | 39791917 ~ 39792333 (+) | True | G802822 |
| TU913562 | other | upstream | 90792 | 39789657 ~ 39790402 (+) | True | G802821 |
| TU913483 | other | upstream | 240325 | 39639254 ~ 39640869 (+) | True | spryd4 |
| TU914248 | other | downstream | 492634 | 40386765 ~ 40389052 (+) | True | LOC110532068 |
| TU914281 | other | downstream | 548765 | 40442896 ~ 40449939 (+) | True | G803437 |
| TU914302 | other | downstream | 573497 | 40467628 ~ 40468002 (+) | True | G803457 |
| TU914604 | other | downstream | 1126805 | 41020936 ~ 41021502 (+) | True | G803728 |
| TU914750 | other | downstream | 1540753 | 41434884 ~ 41435423 (+) | False | LOC110532096 |
