RNA id: TU913750



Basic Information


Item Value
RNA id TU913750
length 208
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G802981
representative True

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 40071506 ~ 40071713 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TAACATGGACCCTCTGGGAAATCCTATGAACTTGTCTATTCCACTGAAAGTCACAGAAACAACTACTATTAGTTGCTTGAAGTAGGCTACTAGGAACTGGTAACAACACAGTCTGTGATTGGCTAACAATGTTTAGATCTGTATGCAGCGAGATAAGATACCATCCCATGAGGTGTTGAGGGAAAGCCAGATTGCCTATAGATTAGAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU913747 lncRNA upstream 3081 40067912 ~ 40068425 (+) True G802978
TU913736 lncRNA upstream 11942 40032634 ~ 40059564 (+) True G802967
TU913735 lncRNA upstream 12119 40032362 ~ 40059387 (+) True G802966
TU913702 lncRNA upstream 66357 40004923 ~ 40005149 (+) True G802947
TU913700 lncRNA upstream 68493 40002798 ~ 40003013 (+) True G802945
TU913765 lncRNA downstream 43326 40115039 ~ 40115538 (+) True G802996
TU913766 lncRNA downstream 44908 40116621 ~ 40116975 (+) True G802997
TU913767 lncRNA downstream 45876 40117589 ~ 40117828 (+) True G802998
TU913790 lncRNA downstream 98569 40170282 ~ 40173004 (+) True G803017
TU913799 lncRNA downstream 112328 40184041 ~ 40184930 (+) False G803026
XM_021615658.2 mRNA upstream 7651 40056808 ~ 40063855 (+) True LOC110532057
XM_021615654.2 mRNA upstream 24953 40013096 ~ 40046553 (+) False LOC110532055
XM_021615655.2 mRNA upstream 24953 40013101 ~ 40046553 (+) True LOC110532055
XM_021615653.2 mRNA upstream 108520 39961471 ~ 39962986 (+) False LOC110532054
XM_021615650.2 mRNA upstream 125421 39939765 ~ 39946085 (+) True LOC110532052
XM_021615663.2 mRNA downstream 4139 40075852 ~ 40085818 (+) True LOC110532060
XM_036987969.1 mRNA downstream 14298 40086011 ~ 40090648 (+) False LOC110532058
XM_036987968.1 mRNA downstream 14389 40086102 ~ 40089385 (+) False LOC110532058
XM_036987966.1 mRNA downstream 14389 40086102 ~ 40090648 (+) False LOC110532058
XM_036987967.1 mRNA downstream 14392 40086105 ~ 40090648 (+) True LOC110532058
TU913576 other upstream 259481 39810327 ~ 39812025 (+) False G802830
TU913578 other upstream 259481 39810327 ~ 39812025 (+) True G802830
TU913563 other upstream 279173 39791917 ~ 39792333 (+) True G802822
TU913562 other upstream 281104 39789657 ~ 39790402 (+) True G802821
TU913483 other upstream 430637 39639254 ~ 39640869 (+) True spryd4
TU914248 other downstream 315052 40386765 ~ 40389052 (+) True LOC110532068
TU914281 other downstream 371183 40442896 ~ 40449939 (+) True G803437
TU914302 other downstream 395915 40467628 ~ 40468002 (+) True G803457
TU914604 other downstream 949223 41020936 ~ 41021502 (+) True G803728
TU914750 other downstream 1363171 41434884 ~ 41435423 (+) False LOC110532096

Expression Profile