RNA id: TU914348



Basic Information


Item Value
RNA id TU914348
length 256
lncRNA type inter_gene
GC content 0.31
exon number 1
gene id G803503
representative True

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 40580984 ~ 40581239 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gcataggcaagatacagtagatggtattgagtgcagtatatacatatgagatgagtatgtaaacaaagtggcatagttaaagtggctagtgatacatgtattacataaagatacagtagatgatatagagtacagtatatacatatgagatgagtatgtaaacaaagtggcatagttaaagtggctagtgatacatgtattacataaagatacagtagatgatatagagtacagtatatacatatacatatgagat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU914320 lncRNA upstream 36836 40509150 ~ 40544148 (+) True G803475
TU914185 lncRNA upstream 170688 40407969 ~ 40410296 (+) True LOC110532069
TU914241 lncRNA upstream 211939 40368814 ~ 40369045 (+) True G803402
TU914240 lncRNA upstream 213937 40366847 ~ 40367047 (+) True G803401
TU914232 lncRNA upstream 232029 40348725 ~ 40348955 (+) True G803393
TU914360 lncRNA downstream 11303 40592542 ~ 40593479 (+) False G803508
TU914358 lncRNA downstream 11354 40592593 ~ 40593479 (+) True G803508
TU914402 lncRNA downstream 86043 40667282 ~ 40668064 (+) True G803542
TU914423 lncRNA downstream 136113 40717352 ~ 40717606 (+) True G803563
TU914426 lncRNA downstream 138771 40720010 ~ 40720231 (+) True G803566
XM_036987986.1 mRNA upstream 6728 40504652 ~ 40574256 (+) False LOC110532072
XM_036987987.1 mRNA upstream 6728 40547508 ~ 40574256 (+) True LOC110532072
XR_002474801.2 mRNA upstream 170587 40407812 ~ 40410397 (+) False LOC110532069
XM_021615677.2 mRNA upstream 187017 40375272 ~ 40393967 (+) False LOC110532068
XM_021615678.2 mRNA upstream 193925 40375272 ~ 40387059 (+) False LOC110532068
XR_002474802.2 mRNA downstream 185043 40766282 ~ 40768598 (+) True LOC110532075
XM_021615690.2 mRNA downstream 334871 40916110 ~ 40918983 (+) False LOC110532080
XM_021615697.2 mRNA downstream 500213 41081452 ~ 41087171 (+) True si:dkey-72l14.3
XM_036986945.1 mRNA downstream 671427 41252666 ~ 41363977 (+) True LOC110531178
XM_036988011.1 mRNA downstream 842359 41423598 ~ 41452922 (+) False LOC110532096
TU914302 other upstream 112982 40467628 ~ 40468002 (+) True G803457
TU914281 other upstream 131045 40442896 ~ 40449939 (+) True G803437
TU914248 other upstream 191932 40386765 ~ 40389052 (+) True LOC110532068
TU913576 other upstream 768959 39810327 ~ 39812025 (+) False G802830
TU914604 other downstream 439697 41020936 ~ 41021502 (+) True G803728
TU914750 other downstream 853645 41434884 ~ 41435423 (+) False LOC110532096
TU916102 other downstream 1440620 42021859 ~ 42024403 (+) True LOC110532114
TU916494 other downstream 1750854 42332093 ~ 42332438 (+) True G805451
TU916660 other downstream 1764937 42346176 ~ 42348786 (+) True G805600

Expression Profile