RNA id: TU919016


Basic Information

Item Value
RNA id TU919016
length 327
RNA type TUCP
GC content 0.52
exon number 1
gene id G807677
representative True

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 44195715 ~ 44196041 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gttccttggtgtccacatcaccaacaaactatcatggtccaagcaaaACCAagagtcatgaagagggcacgacaaaacctatttcccctcaggaagatttggcatgggtcctcagatcctcaaaaggttctacagctgcaccatcaagagcatcctgactggttgcatcactgcctagtatggcaactgcttggcctccgaccagtaggcactacagagggtagtgcgaatggcccaggacatcgctggggccaagctccctgccatccaggacctctataccaggcggtgtcagaggaaggccctaaaaattgtcaaagactccac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU919004 lncRNA upstream 3938 44191067 ~ 44191777 (+) True G807665
TU918992 lncRNA upstream 17552 44177933 ~ 44178163 (+) True G807656
TU918571 lncRNA upstream 25399 44169996 ~ 44170316 (+) True G807289
TU918555 lncRNA upstream 66965 44125065 ~ 44128750 (+) True G807273
TU918491 lncRNA upstream 105406 44019943 ~ 44090309 (+) True G807215
TU919018 lncRNA downstream 569 44196610 ~ 44249756 (+) True G807678
TU919020 lncRNA downstream 3734 44199775 ~ 44202288 (+) True G807680
TU919052 lncRNA downstream 48583 44244624 ~ 44307334 (+) True G807712
TU919187 lncRNA downstream 242443 44438484 ~ 44450953 (+) False G807838
TU919188 lncRNA downstream 242443 44438484 ~ 44449656 (+) True G807838
XR_002474917.2 mRNA upstream 160875 44034316 ~ 44034840 (+) True LOC110533015
XM_036988082.1 mRNA upstream 430853 43743468 ~ 43764862 (+) False wrap73
XM_036988083.1 mRNA upstream 430853 43743468 ~ 43764862 (+) True wrap73
XR_005053255.1 mRNA upstream 505074 43666812 ~ 43690641 (+) False LOC118966053
XM_036988078.1 mRNA upstream 548265 43591505 ~ 43647450 (+) False LOC110531183
XM_021615846.2 mRNA downstream 228973 44425014 ~ 44429101 (+) True LOC110532176
XM_036988106.1 mRNA downstream 315012 44511053 ~ 44790843 (+) False agrn
XM_036988107.1 mRNA downstream 315012 44511053 ~ 44790843 (+) False agrn
XM_036988108.1 mRNA downstream 315012 44511053 ~ 44790843 (+) False agrn
XM_036988109.1 mRNA downstream 315012 44511053 ~ 44790843 (+) False agrn
TU916660 other upstream 1846929 42346176 ~ 42348786 (+) True G805600
TU916494 other upstream 1863277 42332093 ~ 42332438 (+) True G805451
TU916102 other upstream 2171312 42021859 ~ 42024403 (+) True LOC110532114
TU914750 other upstream 2760292 41434884 ~ 41435423 (+) False LOC110532096
TU914604 other upstream 3174213 41020936 ~ 41021502 (+) True G803728
TU919191 other downstream 246621 44442662 ~ 44453077 (+) True G807841
TU921250 other downstream 1938690 46134731 ~ 46135732 (+) True G809685
TU923963 other downstream 3785960 47982001 ~ 47982301 (+) True G812143
TU924562 other downstream 4349413 48545454 ~ 48570593 (+) True G812688
TU924989 other downstream 4763708 48959749 ~ 48959991 (+) True G813071

Expression Profile