Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU927833 |
| length | 1100 |
| lncRNA type | inter_gene |
| GC content | 0.33 |
| exon number | 1 |
| gene id | G815696 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 51331995 ~ 51333094 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU927834 | lncRNA | upstream | 567 | 51330847 ~ 51331428 (+) | True | G815697 |
| TU927832 | lncRNA | upstream | 5743 | 51325904 ~ 51326252 (+) | True | G815695 |
| TU927874 | lncRNA | upstream | 64917 | 51261373 ~ 51267078 (+) | False | G815735 |
| TU927875 | lncRNA | upstream | 64917 | 51261373 ~ 51267078 (+) | True | G815735 |
| TU927873 | lncRNA | upstream | 67214 | 51258909 ~ 51264781 (+) | True | G815734 |
| TU927909 | lncRNA | downstream | 15137 | 51348231 ~ 51350203 (+) | True | G815768 |
| TU928579 | lncRNA | downstream | 266365 | 51599459 ~ 51599793 (+) | True | G816426 |
| TU928580 | lncRNA | downstream | 266882 | 51599976 ~ 51600326 (+) | True | G816427 |
| TU928662 | lncRNA | downstream | 365069 | 51698163 ~ 51698389 (+) | True | G816504 |
| TU928663 | lncRNA | downstream | 367605 | 51700699 ~ 51700970 (+) | True | G816505 |
| XM_021616103.2 | mRNA | upstream | 12613 | 51202733 ~ 51319382 (+) | False | pex14 |
| XM_036988251.1 | mRNA | upstream | 12613 | 51202761 ~ 51319382 (+) | True | pex14 |
| XM_021616101.2 | mRNA | upstream | 150261 | 51173762 ~ 51181734 (+) | True | masp2 |
| LOC110531197 | mRNA | upstream | 204483 | 51125135 ~ 51127512 (+) | True | LOC110531197 |
| XM_021616100.2 | mRNA | upstream | 224249 | 51106327 ~ 51107746 (+) | True | cort |
| XM_036988264.1 | mRNA | downstream | 372772 | 51705866 ~ 51709459 (+) | False | tardbpl |
| XR_005053280.1 | mRNA | downstream | 372772 | 51705866 ~ 51710352 (+) | False | tardbpl |
| XM_036988263.1 | mRNA | downstream | 372773 | 51705867 ~ 51709459 (+) | False | tardbpl |
| XM_021616112.2 | mRNA | downstream | 372774 | 51705868 ~ 51709459 (+) | False | tardbpl |
| XR_002474820.2 | mRNA | downstream | 372774 | 51705868 ~ 51710349 (+) | True | tardbpl |
| TU927741 | other | upstream | 253053 | 51078447 ~ 51078942 (+) | True | G815610 |
| TU927553 | other | upstream | 531614 | 50796214 ~ 50800381 (+) | False | G815428 |
| TU927551 | other | upstream | 531614 | 50796320 ~ 50800381 (+) | True | G815428 |
| TU925067 | other | upstream | 2216377 | 49115137 ~ 49115618 (+) | True | G813139 |
| TU924996 | other | upstream | 2325285 | 49003319 ~ 49006710 (+) | True | G813074 |
| TU927907 | other | downstream | 12278 | 51345372 ~ 51346494 (+) | True | G815767 |
| TU929026 | other | downstream | 990177 | 52323271 ~ 52325640 (+) | True | LOC110532349 |
| TU929242 | other | downstream | 1393327 | 52726421 ~ 52727520 (+) | True | LOC110532368 |
| TU932380 | other | downstream | 3393777 | 54726871 ~ 54727376 (+) | True | G819897 |
| TU933208 | other | downstream | 3900164 | 55233258 ~ 55233798 (+) | True | G820665 |
