Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU928677 |
| length | 277 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G816519 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 51745737 ~ 51746013 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU928633 | lncRNA | upstream | 8603 | 51727771 ~ 51737134 (+) | True | G816478 |
| TU928663 | lncRNA | upstream | 44767 | 51700699 ~ 51700970 (+) | True | G816505 |
| TU928662 | lncRNA | upstream | 47348 | 51698163 ~ 51698389 (+) | True | G816504 |
| TU928580 | lncRNA | upstream | 145411 | 51599976 ~ 51600326 (+) | True | G816427 |
| TU928579 | lncRNA | upstream | 145944 | 51599459 ~ 51599793 (+) | True | G816426 |
| TU928679 | lncRNA | downstream | 1467 | 51747480 ~ 51747703 (+) | True | G816521 |
| TU928680 | lncRNA | downstream | 2044 | 51748057 ~ 51748477 (+) | True | G816522 |
| TU928767 | lncRNA | downstream | 109592 | 51855605 ~ 51857288 (+) | True | G816600 |
| TU928769 | lncRNA | downstream | 121446 | 51867459 ~ 51867996 (+) | True | G816602 |
| TU928791 | lncRNA | downstream | 160312 | 51906325 ~ 51906646 (+) | True | G816624 |
| XR_005053280.1 | mRNA | upstream | 35385 | 51705866 ~ 51710352 (+) | False | tardbpl |
| XR_002474820.2 | mRNA | upstream | 35388 | 51705868 ~ 51710349 (+) | True | tardbpl |
| XM_036988264.1 | mRNA | upstream | 36278 | 51705866 ~ 51709459 (+) | False | tardbpl |
| XM_036988263.1 | mRNA | upstream | 36278 | 51705867 ~ 51709459 (+) | False | tardbpl |
| XM_021616112.2 | mRNA | upstream | 36278 | 51705868 ~ 51709459 (+) | False | tardbpl |
| XM_021616133.2 | mRNA | downstream | 175133 | 51921146 ~ 51924442 (+) | False | lzic |
| XM_021616132.2 | mRNA | downstream | 175211 | 51921224 ~ 51924442 (+) | False | lzic |
| XM_021616131.2 | mRNA | downstream | 175269 | 51921282 ~ 51924442 (+) | True | lzic |
| XM_021616142.1 | mRNA | downstream | 427997 | 52174010 ~ 52176441 (+) | True | LOC110532337 |
| XM_021616144.2 | mRNA | downstream | 436215 | 52182228 ~ 52189437 (+) | True | LOC110532339 |
| TU927907 | other | upstream | 399243 | 51345372 ~ 51346494 (+) | True | G815767 |
| TU927741 | other | upstream | 666795 | 51078447 ~ 51078942 (+) | True | G815610 |
| TU927553 | other | upstream | 945356 | 50796214 ~ 50800381 (+) | False | G815428 |
| TU927551 | other | upstream | 945356 | 50796320 ~ 50800381 (+) | True | G815428 |
| TU925067 | other | upstream | 2630119 | 49115137 ~ 49115618 (+) | True | G813139 |
| TU929026 | other | downstream | 577258 | 52323271 ~ 52325640 (+) | True | LOC110532349 |
| TU929242 | other | downstream | 980408 | 52726421 ~ 52727520 (+) | True | LOC110532368 |
| TU932380 | other | downstream | 2980858 | 54726871 ~ 54727376 (+) | True | G819897 |
| TU933208 | other | downstream | 3487245 | 55233258 ~ 55233798 (+) | True | G820665 |
| TU933425 | other | downstream | 3785024 | 55531037 ~ 55615401 (+) | False | dlgap4a |
