Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU928680 |
| length | 421 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G816522 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 51748057 ~ 51748477 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU928679 | lncRNA | upstream | 354 | 51747480 ~ 51747703 (+) | True | G816521 |
| TU928677 | lncRNA | upstream | 2044 | 51745737 ~ 51746013 (+) | True | G816519 |
| TU928633 | lncRNA | upstream | 10923 | 51727771 ~ 51737134 (+) | True | G816478 |
| TU928663 | lncRNA | upstream | 47087 | 51700699 ~ 51700970 (+) | True | G816505 |
| TU928662 | lncRNA | upstream | 49668 | 51698163 ~ 51698389 (+) | True | G816504 |
| TU928767 | lncRNA | downstream | 107128 | 51855605 ~ 51857288 (+) | True | G816600 |
| TU928769 | lncRNA | downstream | 118982 | 51867459 ~ 51867996 (+) | True | G816602 |
| TU928791 | lncRNA | downstream | 157848 | 51906325 ~ 51906646 (+) | True | G816624 |
| TU928817 | lncRNA | downstream | 204368 | 51952845 ~ 51990544 (+) | True | G816646 |
| TU928835 | lncRNA | downstream | 219083 | 51967560 ~ 51979205 (+) | True | G816663 |
| XR_005053280.1 | mRNA | upstream | 37705 | 51705866 ~ 51710352 (+) | False | tardbpl |
| XR_002474820.2 | mRNA | upstream | 37708 | 51705868 ~ 51710349 (+) | True | tardbpl |
| XM_036988264.1 | mRNA | upstream | 38598 | 51705866 ~ 51709459 (+) | False | tardbpl |
| XM_036988263.1 | mRNA | upstream | 38598 | 51705867 ~ 51709459 (+) | False | tardbpl |
| XM_021616112.2 | mRNA | upstream | 38598 | 51705868 ~ 51709459 (+) | False | tardbpl |
| XM_021616133.2 | mRNA | downstream | 172669 | 51921146 ~ 51924442 (+) | False | lzic |
| XM_021616132.2 | mRNA | downstream | 172747 | 51921224 ~ 51924442 (+) | False | lzic |
| XM_021616131.2 | mRNA | downstream | 172805 | 51921282 ~ 51924442 (+) | True | lzic |
| XM_021616142.1 | mRNA | downstream | 425533 | 52174010 ~ 52176441 (+) | True | LOC110532337 |
| XM_021616144.2 | mRNA | downstream | 433751 | 52182228 ~ 52189437 (+) | True | LOC110532339 |
| TU927907 | other | upstream | 401563 | 51345372 ~ 51346494 (+) | True | G815767 |
| TU927741 | other | upstream | 669115 | 51078447 ~ 51078942 (+) | True | G815610 |
| TU927553 | other | upstream | 947676 | 50796214 ~ 50800381 (+) | False | G815428 |
| TU927551 | other | upstream | 947676 | 50796320 ~ 50800381 (+) | True | G815428 |
| TU925067 | other | upstream | 2632439 | 49115137 ~ 49115618 (+) | True | G813139 |
| TU929026 | other | downstream | 574794 | 52323271 ~ 52325640 (+) | True | LOC110532349 |
| TU929242 | other | downstream | 977944 | 52726421 ~ 52727520 (+) | True | LOC110532368 |
| TU932380 | other | downstream | 2978394 | 54726871 ~ 54727376 (+) | True | G819897 |
| TU933208 | other | downstream | 3484781 | 55233258 ~ 55233798 (+) | True | G820665 |
| TU933425 | other | downstream | 3782560 | 55531037 ~ 55615401 (+) | False | dlgap4a |
