Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU928954 |
| length | 242 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 1 |
| gene id | G816778 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 52172479 ~ 52172720 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU928904 | lncRNA | upstream | 12652 | 52158839 ~ 52159827 (+) | True | G816729 |
| TU928941 | lncRNA | upstream | 15136 | 52157128 ~ 52157343 (+) | True | G816765 |
| TU928935 | lncRNA | upstream | 22550 | 52149729 ~ 52149929 (+) | True | G816759 |
| TU928934 | lncRNA | upstream | 22867 | 52149238 ~ 52149612 (+) | True | G816758 |
| TU928891 | lncRNA | upstream | 23803 | 52148464 ~ 52148676 (+) | True | G816716 |
| TU928957 | lncRNA | downstream | 3818 | 52176538 ~ 52176741 (+) | True | G816781 |
| TU928964 | lncRNA | downstream | 26243 | 52198963 ~ 52199354 (+) | True | G816788 |
| TU928973 | lncRNA | downstream | 32124 | 52204844 ~ 52252878 (+) | True | LOC118966072 |
| TU929001 | lncRNA | downstream | 76825 | 52249545 ~ 52250147 (+) | True | LOC110531200 |
| TU929073 | lncRNA | downstream | 191920 | 52364640 ~ 52366398 (+) | True | G816872 |
| XM_021616133.2 | mRNA | upstream | 248037 | 51921146 ~ 51924442 (+) | False | lzic |
| XM_021616132.2 | mRNA | upstream | 248037 | 51921224 ~ 51924442 (+) | False | lzic |
| XM_021616131.2 | mRNA | upstream | 248037 | 51921282 ~ 51924442 (+) | True | lzic |
| XR_002474820.2 | mRNA | upstream | 462130 | 51705868 ~ 51710349 (+) | True | tardbpl |
| XM_021616112.2 | mRNA | upstream | 463020 | 51705868 ~ 51709459 (+) | False | tardbpl |
| XM_021616142.1 | mRNA | downstream | 1290 | 52174010 ~ 52176441 (+) | True | LOC110532337 |
| XM_021616144.2 | mRNA | downstream | 9508 | 52182228 ~ 52189437 (+) | True | LOC110532339 |
| XM_036988289.1 | mRNA | downstream | 34506 | 52207226 ~ 52216054 (+) | False | si:dkey-6n6.1 |
| XM_036988288.1 | mRNA | downstream | 34508 | 52207228 ~ 52216054 (+) | True | si:dkey-6n6.1 |
| LOC110531199 | mRNA | downstream | 48117 | 52220837 ~ 52224935 (+) | True | LOC110531199 |
| TU927907 | other | upstream | 825985 | 51345372 ~ 51346494 (+) | True | G815767 |
| TU927741 | other | upstream | 1093537 | 51078447 ~ 51078942 (+) | True | G815610 |
| TU927553 | other | upstream | 1372098 | 50796214 ~ 50800381 (+) | False | G815428 |
| TU927551 | other | upstream | 1372098 | 50796320 ~ 50800381 (+) | True | G815428 |
| TU925067 | other | upstream | 3056861 | 49115137 ~ 49115618 (+) | True | G813139 |
| TU929026 | other | downstream | 150551 | 52323271 ~ 52325640 (+) | True | LOC110532349 |
| TU929242 | other | downstream | 553701 | 52726421 ~ 52727520 (+) | True | LOC110532368 |
| TU932380 | other | downstream | 2554151 | 54726871 ~ 54727376 (+) | True | G819897 |
| TU933208 | other | downstream | 3060538 | 55233258 ~ 55233798 (+) | True | G820665 |
| TU933425 | other | downstream | 3358317 | 55531037 ~ 55615401 (+) | False | dlgap4a |
