Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU932713 |
| length | 221 |
| lncRNA type | inter_gene |
| GC content | 0.33 |
| exon number | 1 |
| gene id | G820211 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 55184604 ~ 55184824 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU932675 | lncRNA | upstream | 26336 | 55157091 ~ 55158268 (+) | True | G820175 |
| TU932673 | lncRNA | upstream | 27877 | 55155407 ~ 55156727 (+) | True | G820174 |
| TU932676 | lncRNA | upstream | 35324 | 55127150 ~ 55149280 (+) | True | G820176 |
| TU932662 | lncRNA | upstream | 74405 | 55108836 ~ 55110199 (+) | True | G820163 |
| TU932663 | lncRNA | upstream | 76518 | 55107689 ~ 55108086 (+) | True | G820164 |
| TU933193 | lncRNA | downstream | 36755 | 55221579 ~ 55221882 (+) | True | G820655 |
| TU933191 | lncRNA | downstream | 39212 | 55224036 ~ 55224311 (+) | True | LOC110532406 |
| TU933216 | lncRNA | downstream | 75537 | 55260361 ~ 55260802 (+) | True | G820673 |
| TU933261 | lncRNA | downstream | 113952 | 55298776 ~ 55299160 (+) | True | G820717 |
| TU933278 | lncRNA | downstream | 122890 | 55307714 ~ 55307954 (+) | True | G820734 |
| XM_036988340.1 | mRNA | upstream | 250034 | 54926728 ~ 54934570 (+) | True | twist3 |
| XM_021616270.2 | mRNA | upstream | 878431 | 54295022 ~ 54306173 (+) | True | LOC110532395 |
| XM_021616271.2 | mRNA | upstream | 936689 | 54245323 ~ 54247915 (+) | False | LOC110532396 |
| XM_021616267.2 | mRNA | upstream | 945098 | 54234821 ~ 54239506 (+) | False | LOC110532392 |
| XM_021616281.2 | mRNA | downstream | 7529 | 55192353 ~ 55207365 (+) | False | LOC110532404 |
| XM_036988349.1 | mRNA | downstream | 8730 | 55193554 ~ 55207365 (+) | True | LOC110532404 |
| XM_036988353.1 | mRNA | downstream | 32782 | 55217606 ~ 55224372 (+) | False | LOC110532406 |
| XM_036988352.1 | mRNA | downstream | 32797 | 55217621 ~ 55224372 (+) | False | LOC110532406 |
| XM_036988354.1 | mRNA | downstream | 32797 | 55217621 ~ 55224372 (+) | False | LOC110532406 |
| TU932380 | other | upstream | 457228 | 54726871 ~ 54727376 (+) | True | G819897 |
| TU929242 | other | upstream | 2457084 | 52726421 ~ 52727520 (+) | True | LOC110532368 |
| TU929026 | other | upstream | 2858964 | 52323271 ~ 52325640 (+) | True | LOC110532349 |
| TU927907 | other | upstream | 3838110 | 51345372 ~ 51346494 (+) | True | G815767 |
| TU927741 | other | upstream | 4105662 | 51078447 ~ 51078942 (+) | True | G815610 |
| TU933208 | other | downstream | 48434 | 55233258 ~ 55233798 (+) | True | G820665 |
| TU933425 | other | downstream | 346213 | 55531037 ~ 55615401 (+) | False | dlgap4a |
| TU933495 | other | downstream | 512816 | 55697640 ~ 55697978 (+) | True | G820944 |
| TU933965 | other | downstream | 789218 | 55974042 ~ 55975316 (+) | True | G821363 |
| TU934014 | other | downstream | 876882 | 56061706 ~ 56063655 (+) | True | G821409 |
