Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU939822 |
| length | 260 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G826492 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 60437924 ~ 60438183 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU939755 | lncRNA | upstream | 60424 | 60377270 ~ 60377500 (+) | True | G826430 |
| TU939739 | lncRNA | upstream | 71048 | 60361832 ~ 60366876 (+) | True | G826419 |
| TU939637 | lncRNA | upstream | 86344 | 60297281 ~ 60351580 (+) | True | G826327 |
| TU939646 | lncRNA | upstream | 133719 | 60302598 ~ 60304205 (+) | True | LOC110531228 |
| TU939628 | lncRNA | upstream | 150960 | 60280381 ~ 60286964 (+) | True | G826319 |
| TU939834 | lncRNA | downstream | 7398 | 60445581 ~ 60445804 (+) | True | G826504 |
| TU939876 | lncRNA | downstream | 34727 | 60472910 ~ 60473144 (+) | True | G826545 |
| TU939883 | lncRNA | downstream | 40256 | 60478439 ~ 60478720 (+) | True | G826552 |
| TU939895 | lncRNA | downstream | 45764 | 60483947 ~ 60484328 (+) | True | G826564 |
| TU939897 | lncRNA | downstream | 47635 | 60485818 ~ 60486046 (+) | True | G826566 |
| XM_036986962.1 | mRNA | upstream | 134502 | 60288691 ~ 60303422 (+) | False | LOC110531228 |
| XM_021616575.2 | mRNA | upstream | 151846 | 60281781 ~ 60286078 (+) | True | LOC110532568 |
| XM_036988561.1 | mRNA | upstream | 209465 | 60144449 ~ 60228459 (+) | True | LOC110532566 |
| XM_021616566.2 | mRNA | upstream | 349922 | 60079288 ~ 60088002 (+) | True | LOC110532564 |
| XM_021616565.2 | mRNA | upstream | 360018 | 60065296 ~ 60077906 (+) | True | LOC110532563 |
| XM_036988563.1 | mRNA | downstream | 198340 | 60636523 ~ 61029723 (+) | False | LOC110531229 |
| XM_036988562.1 | mRNA | downstream | 198340 | 60636523 ~ 61072400 (+) | False | LOC110531229 |
| XM_021616576.2 | mRNA | downstream | 665584 | 61103767 ~ 61156703 (+) | False | LOC110532569 |
| XM_021616577.2 | mRNA | downstream | 665584 | 61103767 ~ 61156703 (+) | True | LOC110532569 |
| XM_021616587.2 | mRNA | downstream | 893921 | 61332104 ~ 61362738 (+) | True | ptpn22 |
| TU938963 | other | upstream | 427499 | 60010009 ~ 60010425 (+) | True | G825749 |
| TU938660 | other | upstream | 838954 | 59598029 ~ 59598970 (+) | True | G825484 |
| TU937994 | other | upstream | 1022911 | 59414147 ~ 59415013 (+) | True | G824936 |
| TU937938 | other | upstream | 1055513 | 59377106 ~ 59382411 (+) | True | LOC110532530 |
| TU937803 | other | upstream | 1277728 | 59158581 ~ 59160196 (+) | False | LOC118966079 |
| TU939835 | other | downstream | 7847 | 60446030 ~ 60446534 (+) | True | G826505 |
| TU939988 | other | downstream | 124897 | 60563080 ~ 60563397 (+) | True | G826653 |
| TU940086 | other | downstream | 223186 | 60661369 ~ 60661906 (+) | True | G826751 |
| TU940445 | other | downstream | 774278 | 61212461 ~ 61251238 (+) | True | G827039 |
| TU941829 | other | downstream | 1750999 | 62189182 ~ 62190606 (+) | True | G828274 |
