Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU939895 |
| length | 382 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G826564 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 60483947 ~ 60484328 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU939883 | lncRNA | upstream | 5227 | 60478439 ~ 60478720 (+) | True | G826552 |
| TU939876 | lncRNA | upstream | 10803 | 60472910 ~ 60473144 (+) | True | G826545 |
| TU939834 | lncRNA | upstream | 38143 | 60445581 ~ 60445804 (+) | True | G826504 |
| TU939822 | lncRNA | upstream | 45764 | 60437924 ~ 60438183 (+) | True | G826492 |
| TU939755 | lncRNA | upstream | 106447 | 60377270 ~ 60377500 (+) | True | G826430 |
| TU939897 | lncRNA | downstream | 1490 | 60485818 ~ 60486046 (+) | True | G826566 |
| TU939911 | lncRNA | downstream | 20050 | 60504378 ~ 60504588 (+) | True | G826580 |
| TU940000 | lncRNA | downstream | 87378 | 60571706 ~ 60571908 (+) | True | G826665 |
| TU940009 | lncRNA | downstream | 98497 | 60582825 ~ 60583702 (+) | True | G826674 |
| TU940011 | lncRNA | downstream | 105871 | 60590199 ~ 60590473 (+) | True | G826676 |
| XM_036986962.1 | mRNA | upstream | 180525 | 60288691 ~ 60303422 (+) | False | LOC110531228 |
| XM_021616575.2 | mRNA | upstream | 197869 | 60281781 ~ 60286078 (+) | True | LOC110532568 |
| XM_036988561.1 | mRNA | upstream | 255488 | 60144449 ~ 60228459 (+) | True | LOC110532566 |
| XM_021616566.2 | mRNA | upstream | 395945 | 60079288 ~ 60088002 (+) | True | LOC110532564 |
| XM_021616565.2 | mRNA | upstream | 406041 | 60065296 ~ 60077906 (+) | True | LOC110532563 |
| XM_036988563.1 | mRNA | downstream | 152195 | 60636523 ~ 61029723 (+) | False | LOC110531229 |
| XM_036988562.1 | mRNA | downstream | 152195 | 60636523 ~ 61072400 (+) | False | LOC110531229 |
| XM_021616576.2 | mRNA | downstream | 619439 | 61103767 ~ 61156703 (+) | False | LOC110532569 |
| XM_021616577.2 | mRNA | downstream | 619439 | 61103767 ~ 61156703 (+) | True | LOC110532569 |
| XM_021616587.2 | mRNA | downstream | 847776 | 61332104 ~ 61362738 (+) | True | ptpn22 |
| TU939835 | other | upstream | 37413 | 60446030 ~ 60446534 (+) | True | G826505 |
| TU938963 | other | upstream | 473522 | 60010009 ~ 60010425 (+) | True | G825749 |
| TU938660 | other | upstream | 884977 | 59598029 ~ 59598970 (+) | True | G825484 |
| TU937994 | other | upstream | 1068934 | 59414147 ~ 59415013 (+) | True | G824936 |
| TU937938 | other | upstream | 1101536 | 59377106 ~ 59382411 (+) | True | LOC110532530 |
| TU939988 | other | downstream | 78752 | 60563080 ~ 60563397 (+) | True | G826653 |
| TU940086 | other | downstream | 177041 | 60661369 ~ 60661906 (+) | True | G826751 |
| TU940445 | other | downstream | 728133 | 61212461 ~ 61251238 (+) | True | G827039 |
| TU941829 | other | downstream | 1704854 | 62189182 ~ 62190606 (+) | True | G828274 |
| TU942478 | other | downstream | 2138911 | 62623239 ~ 62627842 (+) | True | LOC110532602 |
