Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU941174 |
| length | 1110 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 3 |
| gene id | G827709 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 61093053 ~ 61094645 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
61,092,000
61,092,400
61,092,800
61,093,200
61,093,600
61,094,000
61,094,400
61,094,800
61,095,200
61,095,600
61,096,000
61,096,400
61,096,800
61,097,200
61,097,600
61,098,000
61,098,400
61,098,800
NC_048573.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU941164 | lncRNA | downstream | 3990 | 61088781 ~ 61089063 (-) | True | G827702 |
| TU941157 | lncRNA | downstream | 11590 | 61080972 ~ 61081463 (-) | True | G827695 |
| TU941153 | lncRNA | downstream | 15091 | 61077752 ~ 61077962 (-) | True | G827692 |
| TU941141 | lncRNA | downstream | 35250 | 61056966 ~ 61057803 (-) | True | G827680 |
| TU941128 | lncRNA | downstream | 63271 | 61029132 ~ 61029782 (-) | True | G827669 |
| TU941167 | lncRNA | upstream | 54338 | 61148983 ~ 61152907 (-) | True | G827705 |
| TU941268 | lncRNA | upstream | 237493 | 61332138 ~ 61347355 (-) | True | G827779 |
| TU941279 | lncRNA | upstream | 263111 | 61357756 ~ 61361697 (-) | True | G827785 |
| TU941255 | lncRNA | upstream | 268050 | 61362695 ~ 61366798 (-) | False | G827771 |
| TU941259 | lncRNA | upstream | 268050 | 61362695 ~ 61366798 (-) | True | G827771 |
| XR_002474855.2 | mRNA | downstream | 817281 | 60228462 ~ 60275772 (-) | False | LOC110532567 |
| XR_005053312.1 | mRNA | downstream | 817281 | 60228462 ~ 60275772 (-) | False | LOC110532567 |
| XR_002474856.2 | mRNA | downstream | 817281 | 60229514 ~ 60275772 (-) | False | LOC110532567 |
| XM_021616572.2 | mRNA | downstream | 817282 | 60228462 ~ 60275771 (-) | False | LOC110532567 |
| XM_021616568.2 | mRNA | downstream | 817283 | 60228462 ~ 60275770 (-) | False | LOC110532567 |
| XR_002474859.2 | mRNA | upstream | 108567 | 61203212 ~ 61206086 (-) | True | LOC110532573 |
| XM_036988566.1 | mRNA | upstream | 119908 | 61214553 ~ 61237886 (-) | False | LOC118966083 |
| XM_036988565.1 | mRNA | upstream | 119908 | 61214553 ~ 61237917 (-) | False | LOC118966083 |
| XM_036988567.1 | mRNA | upstream | 119908 | 61214553 ~ 61237917 (-) | False | LOC118966083 |
| XM_036988568.1 | mRNA | upstream | 119908 | 61214553 ~ 61237917 (-) | False | LOC118966083 |
| TU941127 | other | downstream | 20688 | 61028372 ~ 61072365 (-) | True | G827668 |
| TU939603 | other | downstream | 817312 | 60251601 ~ 60275741 (-) | True | LOC110532567 |
| TU939209 | other | downstream | 1454159 | 59638346 ~ 59638894 (-) | True | G825961 |
| TU938424 | other | downstream | 1869572 | 59222543 ~ 59223481 (-) | True | LOC118966080 |
| TU938079 | other | downstream | 2424968 | 58664782 ~ 58668085 (-) | False | LOC110531218 |
| TU941450 | other | upstream | 593123 | 61687768 ~ 61703931 (-) | False | tmem269 |
| TU941451 | other | upstream | 593123 | 61687768 ~ 61717965 (-) | False | tmem269 |
| TU941455 | other | upstream | 593123 | 61687768 ~ 61717965 (-) | True | tmem269 |
| TU943351 | other | upstream | 1695943 | 62790588 ~ 62792496 (-) | True | G829644 |
| TU944349 | other | upstream | 2768203 | 63862848 ~ 63899304 (-) | True | LOC110532632 |
