RNA id: TU947014


Basic Information

Item Value
RNA id TU947014
length 243
lncRNA type inter_gene
GC content 0.56
exon number 1
gene id G832814
representative True

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 66432401 ~ 66432643 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

TCTGTCTCGTTgctcccagtcctctcctctcttgtctctccGTCTCGTTgctcccagtcctctcctctcttctctctgtctcgttgCTCCCAGTCCTCTACTCTCTTGTCTCTCCGTCTCGTTgctcccagtcctctcctctcttgtctctctgtctcgttgctcccagtcctctcctctcttgtctctctgtctcgttgcTCCCAGTCCTCTcgtctcttgtctctctgtctcgttgctccc

Function

GO: NA

KEGG:

id description

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU947013 lncRNA downstream 530 66431656 ~ 66431871 (-) True G832813
TU946994 lncRNA downstream 36827 66386092 ~ 66395574 (-) True G832798
TU946988 lncRNA downstream 53124 66373434 ~ 66379277 (-) True G832792
TU946975 lncRNA downstream 77711 66353225 ~ 66354690 (-) True G832780
TU946915 lncRNA downstream 155393 66275620 ~ 66277008 (-) True G832727
TU947015 lncRNA upstream 160 66432803 ~ 66433246 (-) True G832815
TU947018 lncRNA upstream 2809 66435452 ~ 66435691 (-) True G832818
TU947020 lncRNA upstream 6960 66439603 ~ 66441656 (-) True G832820
TU947034 lncRNA upstream 34137 66466780 ~ 66466982 (-) True G832834
TU947036 lncRNA upstream 35666 66468309 ~ 66468566 (-) True G832836
XM_036988730.1 mRNA downstream 1484 66228457 ~ 66430917 (-) False LOC110531240
XM_021616785.2 mRNA downstream 284784 66127916 ~ 66147617 (-) False LOC110532692
XM_021616786.2 mRNA downstream 284784 66127916 ~ 66147617 (-) False LOC110532692
XM_021616787.2 mRNA downstream 328350 66081763 ~ 66104051 (-) False LOC110532694
XM_036988732.1 mRNA upstream 90019 66522662 ~ 66543277 (-) True LOC118966098
XR_002474877.2 mRNA upstream 153966 66586609 ~ 66589365 (-) True LOC110532712
XM_036988733.1 mRNA upstream 164557 66597200 ~ 66619536 (-) True LOC110531241
XM_036988743.1 mRNA upstream 195277 66627920 ~ 66751115 (-) False l1cama
XM_036988739.1 mRNA upstream 195277 66627920 ~ 66751117 (-) False l1cama
TU946914 other downstream 1632 66248103 ~ 66430769 (-) True LOC110531240
TU946916 other downstream 194227 66234991 ~ 66238174 (-) False LOC110531240
TU946674 other downstream 284716 66127916 ~ 66147685 (-) True LOC110532692
TU946673 other downstream 284796 66127916 ~ 66147605 (-) False LOC110532692
TU946657 other downstream 396221 66035872 ~ 66036180 (-) True G832503
TU947239 other upstream 76075 66508718 ~ 66511566 (-) False G832991
TU947288 other upstream 154769 66587412 ~ 66588680 (-) False G833029
TU947289 other upstream 154769 66587412 ~ 66588341 (-) False G833029
TU947290 other upstream 154769 66587412 ~ 66588680 (-) True G833029
TU947907 other upstream 746606 67179249 ~ 67185243 (-) False G833521

Expression Profile