Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_036989700.1 |
| length | 5305 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 20 |
| gene id | LOC110533345 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 11567493 ~ 11583280 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
11,550,000
11,552,000
11,554,000
11,556,000
11,558,000
11,560,000
11,562,000
11,564,000
11,566,000
11,568,000
11,570,000
11,572,000
11,574,000
11,576,000
11,578,000
11,580,000
11,582,000
11,584,000
NC_048574.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU973312 | lncRNA | downstream | 6245 | 11541197 ~ 11561248 (-) | True | G853972 |
| TU973307 | lncRNA | downstream | 35265 | 11531192 ~ 11532228 (-) | True | G853968 |
| TU973306 | lncRNA | downstream | 36439 | 11528866 ~ 11531054 (-) | True | G853967 |
| TU973146 | lncRNA | downstream | 46844 | 11520450 ~ 11520649 (-) | True | G853828 |
| TU973142 | lncRNA | downstream | 48269 | 11518933 ~ 11519224 (-) | True | G853824 |
| TU973364 | lncRNA | upstream | 34825 | 11618105 ~ 11619105 (-) | False | G854017 |
| TU973365 | lncRNA | upstream | 34825 | 11618105 ~ 11619105 (-) | True | G854017 |
| TU973456 | lncRNA | upstream | 148787 | 11732067 ~ 11732317 (-) | True | G854102 |
| TU973470 | lncRNA | upstream | 156235 | 11739515 ~ 11739763 (-) | True | G854116 |
| TU973479 | lncRNA | upstream | 160834 | 11744114 ~ 11749161 (-) | True | G854125 |
| XM_021617455.2 | mRNA | downstream | 3280 | 11561936 ~ 11564213 (-) | True | LOC110533344 |
| XM_021617454.2 | mRNA | downstream | 92792 | 11467381 ~ 11474701 (-) | True | LOC110533343 |
| XR_005034347.1 | mRNA | downstream | 476219 | 11090021 ~ 11091274 (-) | True | LOC118936915 |
| XM_021617449.2 | mRNA | downstream | 537982 | 11026087 ~ 11029511 (-) | False | bod1 |
| XM_021617459.2 | mRNA | upstream | 203915 | 11787195 ~ 11868573 (-) | True | kctd16b |
| XM_036989704.1 | mRNA | upstream | 511054 | 12094334 ~ 12239363 (-) | False | LOC110534849 |
| XM_036989705.1 | mRNA | upstream | 511054 | 12094334 ~ 12239363 (-) | False | LOC110534849 |
| XM_036989703.1 | mRNA | upstream | 511054 | 12094334 ~ 12239835 (-) | False | LOC110534849 |
| trnaa-ugc-40 | mRNA | upstream | 614945 | 12198225 ~ 12198294 (-) | True | trnaa-ugc-40 |
| TU973046 | other | downstream | 124903 | 11442252 ~ 11442590 (-) | True | G853740 |
| TU972516 | other | downstream | 561835 | 11005109 ~ 11005658 (-) | True | G853244 |
| TU971979 | other | downstream | 1104843 | 10462256 ~ 10462650 (-) | True | G852802 |
| TU969585 | other | downstream | 3135452 | 8431531 ~ 8432041 (-) | True | G850763 |
| TU969056 | other | downstream | 3820869 | 7741302 ~ 7746624 (-) | True | G850323 |
| TU973362 | other | upstream | 31976 | 11615256 ~ 11620922 (-) | True | G854016 |
| TU973775 | other | upstream | 201840 | 11785120 ~ 11785853 (-) | True | G854402 |
| TU974134 | other | upstream | 710823 | 12294103 ~ 12294536 (-) | True | G854734 |
| TU974511 | other | upstream | 998113 | 12581393 ~ 12611178 (-) | True | G855079 |
| TU976589 | other | upstream | 2601007 | 14184287 ~ 14184974 (-) | False | G856922 |
