Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021617942.2 |
| length | 1331 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 9 |
| gene id | LOC110533583 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 27305871 ~ 27311822 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006099 | tricarboxylic acid cycle | biological_process |
| GO:0006108 | malate metabolic process | biological_process |
| GO:0044262 | cellular carbohydrate metabolic process | biological_process |
| GO:0030060 | L-malate dehydrogenase activity | molecular_function |
| id | description |
|---|---|
| K00026 | MDH2; malate dehydrogenase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU994199 | lncRNA | downstream | 4233 | 27301388 ~ 27301638 (-) | True | G873273 |
| TU994197 | lncRNA | downstream | 5930 | 27299604 ~ 27299941 (-) | True | G873271 |
| TU994103 | lncRNA | downstream | 132349 | 27173144 ~ 27173522 (-) | True | G873191 |
| TU994104 | lncRNA | downstream | 137081 | 27168038 ~ 27168790 (-) | True | G873192 |
| TU994126 | lncRNA | downstream | 141321 | 27164158 ~ 27164550 (-) | False | G873209 |
| TU994208 | lncRNA | upstream | 6710 | 27318532 ~ 27376257 (-) | True | G873281 |
| TU994227 | lncRNA | upstream | 23022 | 27334844 ~ 27336456 (-) | True | G873297 |
| TU994279 | lncRNA | upstream | 96948 | 27408770 ~ 27409200 (-) | True | G873346 |
| TU994347 | lncRNA | upstream | 185641 | 27497463 ~ 27499392 (-) | True | G873409 |
| TU994346 | lncRNA | upstream | 187790 | 27499612 ~ 27502735 (-) | True | LOC110534878 |
| XM_021617940.2 | mRNA | downstream | 310 | 27289957 ~ 27305561 (-) | True | LOC110533581 |
| XM_021617930.2 | mRNA | downstream | 127184 | 27174930 ~ 27178687 (-) | True | pex12 |
| XR_002474984.2 | mRNA | downstream | 211169 | 27092272 ~ 27094702 (-) | False | LOC110533573 |
| XR_005053607.1 | mRNA | downstream | 211169 | 27092272 ~ 27094702 (-) | True | LOC110533573 |
| XM_021617915.2 | mRNA | downstream | 224131 | 27058163 ~ 27081740 (-) | True | LOC110533571 |
| XM_036989994.1 | mRNA | upstream | 18767 | 27330589 ~ 27355997 (-) | False | LOC110533580 |
| XM_021617934.2 | mRNA | upstream | 18767 | 27330589 ~ 27366153 (-) | False | LOC110533580 |
| XM_036989985.1 | mRNA | upstream | 18767 | 27330589 ~ 27366153 (-) | False | LOC110533580 |
| XM_036989989.1 | mRNA | upstream | 18767 | 27330589 ~ 27366153 (-) | False | LOC110533580 |
| XM_036989987.1 | mRNA | upstream | 18767 | 27330589 ~ 27366154 (-) | False | LOC110533580 |
| TU994124 | other | downstream | 141321 | 27162900 ~ 27164550 (-) | False | G873209 |
| TU993955 | other | downstream | 394245 | 26890025 ~ 26911626 (-) | False | LOC110533569 |
| TU993956 | other | downstream | 398919 | 26890025 ~ 26906952 (-) | True | LOC110533569 |
| TU987118 | other | downstream | 5482250 | 21819111 ~ 21823621 (-) | True | G866654 |
| TU986426 | other | downstream | 5546019 | 21759124 ~ 21759852 (-) | True | G865988 |
| TU994221 | other | upstream | 40571 | 27352393 ~ 27353246 (-) | True | LOC110533580 |
| TU994733 | other | upstream | 271107 | 27582929 ~ 27584262 (-) | True | G873784 |
| TU995737 | other | upstream | 1228407 | 28540229 ~ 28543267 (-) | True | G874706 |
| TU996256 | other | upstream | 1629418 | 28941240 ~ 28985070 (-) | True | G875194 |
| TU998135 | other | upstream | 2603545 | 29915367 ~ 29916505 (-) | True | LOC110533621 |
