Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021617957.2 |
| length | 758 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 6 |
| gene id | LOC110533592 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 27880392 ~ 27888907 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0005509 | calcium ion binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU994460 | lncRNA | upstream | 177203 | 27702967 ~ 27703189 (+) | True | G873521 |
| TU994458 | lncRNA | upstream | 179799 | 27699799 ~ 27700593 (+) | True | G873519 |
| TU994456 | lncRNA | upstream | 184392 | 27695751 ~ 27696000 (+) | True | G873517 |
| TU994454 | lncRNA | upstream | 185848 | 27694156 ~ 27694544 (+) | True | G873515 |
| TU994453 | lncRNA | upstream | 187612 | 27692523 ~ 27692780 (+) | True | G873514 |
| TU994653 | lncRNA | downstream | 87180 | 27976087 ~ 27976327 (+) | True | G873712 |
| TU994670 | lncRNA | downstream | 121206 | 28010113 ~ 28011246 (+) | False | G873724 |
| TU994671 | lncRNA | downstream | 121429 | 28010336 ~ 28011507 (+) | True | G873724 |
| TU994675 | lncRNA | downstream | 125998 | 28014905 ~ 28015174 (+) | True | G873728 |
| TU994674 | lncRNA | downstream | 126956 | 28015863 ~ 28016094 (+) | True | G873727 |
| XM_021617945.2 | mRNA | upstream | 383655 | 27409651 ~ 27496737 (+) | False | ppm1e |
| XM_021617941.2 | mRNA | upstream | 483674 | 27366588 ~ 27396718 (+) | True | LOC110533582 |
| XM_036989995.1 | mRNA | upstream | 483675 | 27366588 ~ 27396717 (+) | False | LOC110533582 |
| XM_021617944.2 | mRNA | upstream | 549808 | 27309669 ~ 27330584 (+) | False | LOC110533584 |
| XM_021617943.2 | mRNA | upstream | 549808 | 27323617 ~ 27330584 (+) | True | LOC110533584 |
| XM_021617958.2 | mRNA | downstream | 102773 | 27991680 ~ 28004015 (+) | False | LOC110533593 |
| XM_036990004.1 | mRNA | downstream | 102773 | 27991680 ~ 28004015 (+) | False | LOC110533593 |
| XM_036990002.1 | mRNA | downstream | 102881 | 27991788 ~ 28004015 (+) | False | LOC110533593 |
| XM_036990003.1 | mRNA | downstream | 102881 | 27991788 ~ 28004015 (+) | True | LOC110533593 |
| XR_005034350.1 | mRNA | downstream | 254406 | 28143313 ~ 28144703 (+) | True | LOC118936920 |
| TU992619 | other | upstream | 383520 | 27492733 ~ 27496872 (+) | False | ppm1e |
| TU992620 | other | upstream | 383520 | 27492733 ~ 27496872 (+) | False | ppm1e |
| TU992621 | other | upstream | 383520 | 27492733 ~ 27496872 (+) | True | ppm1e |
| TU992474 | other | upstream | 611598 | 27261756 ~ 27268794 (+) | True | ap2b1 |
| TU992259 | other | upstream | 1021289 | 26853778 ~ 26859103 (+) | True | LOC110534876 |
| TU995068 | other | downstream | 200999 | 28089906 ~ 28117360 (+) | True | G874108 |
| TU995148 | other | downstream | 273920 | 28162827 ~ 28170253 (+) | False | LOC110533598 |
| TU995448 | other | downstream | 667633 | 28556540 ~ 28557644 (+) | True | G874438 |
| TU995386 | other | downstream | 688545 | 28577452 ~ 28584415 (+) | True | G874378 |
| TU995526 | other | downstream | 838867 | 28727774 ~ 28738905 (+) | True | G874510 |
